HHsearch alignment for GI: 254780601 and conserved domain: COG1474
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=95.31 E-value=0.2 Score=28.79 Aligned_cols=103 Identities=25% Similarity=0.303 Sum_probs=46.3
Q ss_pred HHHHHCC---CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 9999759---9699992898746899999999986104212255688279998499899999999999985446987999
Q gi|254780601|r 31 LNPDLRE---KDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAV 107 (573)
Q Consensus 31 ip~~l~g---~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~~~~~v~~ 107 (573)
T Consensus 33 l~~~~~~~~p~n~~iyG~~GTGKT~~~-~~v~~~l~~~~~~~~-----~~yINc~~~~t~~~i~~---~i~~~~~-~~-p 101 (366)
T COG1474 33 LAPALRGERPSNIIIYGPTGTGKTATV-KFVMEELEESSANVE-----VVYINCLELRTPYQVLS---KILNKLG-KV-P 101 (366)
T ss_pred HHHHHCCCCCCCEEEECCCCCCHHHHH-HHHHHHHHHHCCCCC-----EEEEEEEECCCHHHHHH---HHHHHHC-CC-C
T ss_conf 999855899860799889998732899-999999973315675-----79995130787879999---9999826-89-9
Q ss_pred EECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 98899879999961289759982231013321000122464318999613110010
Q gi|254780601|r 108 CIGGVSVHRERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDL 163 (573)
Q Consensus 108 ~~gg~~~~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~ 163 (573)
T Consensus 102 ~-~g~~~~~~~~--------------~l~~~~~~----~~~~~IvvLDEid~L~~~ 138 (366)
T COG1474 102 L-TGDSSLEILK--------------RLYDNLSK----KGKTVIVILDEVDALVDK 138 (366)
T ss_pred C-CCCCHHHHHH--------------HHHHHHHH----CCCEEEEEECCHHHHHCC
T ss_conf 7-6763268999--------------99997774----187599997647654154