HHsearch alignment for GI: 254780601 and conserved domain: KOG0329
>KOG0329 consensus.
Probab=100.00 E-value=0 Score=449.58 Aligned_cols=324 Identities=27% Similarity=0.485 Sum_probs=287.0
Q ss_pred CCC--CCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
Q ss_conf 779--988999999978798789899999999975996999928987468999999999861042122556882799984
Q gi|254780601|r 4 FEN--IPQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIA 81 (573)
Q Consensus 4 f~~--l~~~l~~~l~~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~ 81 (573)
T Consensus 44 frdfllkpellraivdcgfehpsevqhecipqailgmdvlcqaksgmgktavfvl~tlqqiepv~g------~vsvlvmc 117 (387)
T KOG0329 44 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVDG------QVSVLVMC 117 (387)
T ss_pred HHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHEECCCCCCCEEEEEHHHHHHCCCCCC------EEEEEEEE
T ss_conf 665531899999987325789167644200477634112010025788436552223552378898------07999996
Q ss_pred CCHHHHHHHHHHHHHHHHHC-CCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCC
Q ss_conf 99899999999999985446-98799998899879999961289759982231013321000122464318999613110
Q gi|254780601|r 82 PTRELAVQVGRELEWLYAKT-GVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEM 160 (573)
Q Consensus 82 PTrELa~Qv~~~~~~l~~~~-~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~m 160 (573)
T Consensus 118 htrelafqi~~ey~rfskymP~vkvaVFfGG~~Ikkdee~lk~~PhivVgTPGrilALvr~k~l~lk~vkhFvlDEcdkm 197 (387)
T KOG0329 118 HTRELAFQISKEYERFSKYMPSVKVSVFFGGLFIKKDEELLKNCPHIVVGTPGRILALVRNRSLNLKNVKHFVLDECDKM 197 (387)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCEECCCCHHHHHCCCEEEECCCHHHHHHHHHCCCCHHHCCEEEHHHHHHH
T ss_conf 21899999889999997548884589997553103469988279908976828899998724575320321123337789
Q ss_pred CC-CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCC-CCCCCCCHHCCCCCCCHHHHHHHHC
Q ss_conf 01-001235788875214334225631111222001111210123333233323-2566520000000000024554200
Q gi|254780601|r 161 LD-LGFRDDIEFILDSSPKKRRMLMFSATISPAITTLAKNYQKDAVRVNIASEN-RQHSDIDYRAVLVALSDRDNAIVNI 238 (573)
Q Consensus 161 l~-~gf~~~i~~i~~~~p~~~q~~l~SAT~~~~i~~l~~~~~~~p~~i~~~~~~-~~~~~i~~~~~~v~~~~k~~~l~~l 238 (573)
T Consensus 198 le~lDMrRDvQEifr~tp~~KQvmmfsatlskeiRpvC~kFmQdPmEi~vDdE~KLtLHGLqQ~YvkLke~eKNrkl~dL 277 (387)
T KOG0329 198 LEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCHKFMQDPMEIFVDDEAKLTLHGLQQYYVKLKENEKNRKLNDL 277 (387)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99878888799986328653203454201315667887755218166502415655333477877766555543566656
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 10235641677513023345655555422666301048999999999986654488149985386500145788733897
Q gi|254780601|r 239 LRYHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIH 318 (573)
Q Consensus 239 l~~~~~~~~ivF~~t~~~~~~l~~~L~~~g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~~v~~Vin 318 (573)
T Consensus 278 Ld~LeFNQVvIFvKsv~R------------------------------l~-f---~kr-~vat~lfgrgmdiervNi~~N 322 (387)
T KOG0329 278 LDVLEFNQVVIFVKSVQR------------------------------LS-F---QKR-LVATDLFGRGMDIERVNIVFN 322 (387)
T ss_pred HHHHHHCCEEEEEEHHHH------------------------------HH-H---HHH-HHHHHHHCCCCCCCCCEEEEC
T ss_conf 545441204676203445------------------------------55-6---666-677664046667332202322
Q ss_pred ECCCCCHHHHHHHHCCCCCCCCCCEEEEEECHH-HHHHHHHHHHHHHCCCC
Q ss_conf 058874789998603010378886025640599-99999999998506641
Q gi|254780601|r 319 AELSSNPENLLHRSGRTGRAGRKGMSVFVIPQN-MQRRAERLFREANVSVV 368 (573)
Q Consensus 319 ~d~P~~~~~yvHR~GRtgRag~~G~ai~l~~~~-e~~~~~~i~~~~~~~~~ 368 (573)
T Consensus 323 Ydmp~~~DtYlHrv~rAgrfGtkglaitfvs~e~da~iLn~vqdRf~v~i~ 373 (387)
T KOG0329 323 YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNPVQDRFEVNIK 373 (387)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCEEEHHCCHHHHHHHCHHHHHHHCCHH
T ss_conf 689887127888762430356555201000111267774316676550086