HHsearch alignment for GI: 254780601 and conserved domain: KOG0344
>KOG0344 consensus.
Probab=100.00 E-value=0 Score=496.11 Aligned_cols=358 Identities=27% Similarity=0.347 Sum_probs=312.3
Q ss_pred CCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHH
Q ss_conf 98899999997879878989999999997599699992898746899999999986104212255688279998499899
Q gi|254780601|r 7 IPQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTREL 86 (573)
Q Consensus 7 l~~~l~~~l~~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrEL 86 (573)
T Consensus 143 ~~~~ll~nl~~~~F~~Pt~iq~~aipvfl~~r~~lAcapTGsgKtlaf~~Pil~~L~~~~~-~~~~~gl~a~Il~ptreL 221 (593)
T KOG0344 143 MNKRLLENLQELGFDEPTPIQKQAIPVFLEKRDVLACAPTGSGKTLAFNLPILQHLKDLSQ-EKHKVGLRALILSPTREL 221 (593)
T ss_pred HCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHC-CCCCCCEEEEEECCHHHH
T ss_conf 1489997676278888773100115666413305886357886205655699999987520-357654278884444999
Q ss_pred HHHHHHHHHHHH--HHCCCEEEEEECC-CCHHHHHHHHCCCCEEEEECCCCHHHHHHCCC--CCCCCCEEEEEECCCCCC
Q ss_conf 999999999985--4469879999889-98799999612897599822310133210001--224643189996131100
Q gi|254780601|r 87 AVQVGRELEWLY--AKTGVVVAVCIGG-VSVHRERRDLQNGAHIVVGTPGRLCDHIRGKG--LNISHLKAVVLDEADEML 161 (573)
Q Consensus 87 a~Qv~~~~~~l~--~~~~~~v~~~~gg-~~~~~q~~~l~~~~~iiv~TPgrl~d~~~~~~--l~l~~v~~lVlDEaD~ml 161 (573)
T Consensus 222 a~Qi~re~~k~~~~~~t~~~a~~~~~~~~~~qk~a~~~~~k~dili~TP~ri~~~~~~~~~~idl~~V~~lV~dEaD~lf 301 (593)
T KOG0344 222 AAQIYREMRKYSIDEGTSLRAAQFSKPAYPSQKPAFLSDEKYDILISTPMRIVGLLGLGKLNIDLSKVEWLVVDEADLLF 301 (593)
T ss_pred HHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHEEEEEEECHHHHHH
T ss_conf 99999999855777787534551666653110332467778878861879999985589753201203567664687650
Q ss_pred CC-HHHHHHHHHHHHCC-CCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCC-CHHHHHHHHC
Q ss_conf 10-01235788875214-334225631111222001111210123333233323256652000000000-0024554200
Q gi|254780601|r 162 DL-GFRDDIEFILDSSP-KKRRMLMFSATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVAL-SDRDNAIVNI 238 (573)
Q Consensus 162 ~~-gf~~~i~~i~~~~p-~~~q~~l~SAT~~~~i~~l~~~~~~~p~~i~~~~~~~~~~~i~~~~~~v~~-~~k~~~l~~l 238 (573)
T Consensus 302 e~~~f~~Qla~I~sac~s~~i~~a~FSat~~~~VEE~~~~i~~~~~~vivg~~~sa~~~V~QelvF~gse~~K~lA~rq~ 381 (593)
T KOG0344 302 EPEFFVEQLADIYSACQSPDIRVALFSATISVYVEEWAELIKSDLKRVIVGLRNSANETVDQELVFCGSEKGKLLALRQL 381 (593)
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEEECCHHHHHHHHHH
T ss_conf 81569999999999852852225663214607799999986505336898425257655455512110434577889999
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHH-HHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 10235641677513023345655555-42266630104899999999998665448814998538650014578873389
Q gi|254780601|r 239 LRYHGAKNAIVFCSTRASVSRFTKVL-AEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVI 317 (573)
Q Consensus 239 l~~~~~~~~ivF~~t~~~~~~l~~~L-~~~g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~~v~~Vi 317 (573)
T Consensus 382 v~~g~~PP~lIfVQs~eRak~L~~~L~~~~~i~v~vIh~e~~~~qrde~~~~FR~g~IwvLicTdll~RGiDf~gvn~VI 461 (593)
T KOG0344 382 VASGFKPPVLIFVQSKERAKQLFEELEIYDNINVDVIHGERSQKQRDETMERFRIGKIWVLICTDLLARGIDFKGVNLVI 461 (593)
T ss_pred HHCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCCEEE
T ss_conf 86158997489885388899999986423576634676366666778999998506706888504665455645763689
Q ss_pred EECCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHC
Q ss_conf 705887478999860301037888602564059999999999998506
Q gi|254780601|r 318 HAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNMQRRAERLFREANV 365 (573)
Q Consensus 318 n~d~P~~~~~yvHR~GRtgRag~~G~ai~l~~~~e~~~~~~i~~~~~~ 365 (573)
T Consensus 462 nyD~p~s~~syihrIGRtgRag~~g~Aitfytd~d~~~ir~iae~~~~ 509 (593)
T KOG0344 462 NYDFPQSDLSYIHRIGRTGRAGRSGKAITFYTDQDMPRIRSIAEVMEQ 509 (593)
T ss_pred ECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 537872247888873025788988616998632553455568999997