HHsearch alignment for GI: 254780601 and conserved domain: KOG0348
>KOG0348 consensus.
Probab=100.00 E-value=0 Score=597.59 Aligned_cols=368 Identities=33% Similarity=0.485 Sum_probs=317.6
Q ss_pred CCC--CCCHHHHHHHH-HCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
Q ss_conf 777--99889999999-787987898999999999759969999289874689999999998610421225568827999
Q gi|254780601|r 3 IFE--NIPQVIGEALS-ERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALA 79 (573)
Q Consensus 3 ~f~--~l~~~l~~~l~-~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~li 79 (573)
T Consensus 137 ~f~~LGL~~~lv~~L~~~m~i~~pTsVQkq~IP~lL~grD~lV~aQTGSGKTLAYllPiVq~Lq~m~~ki~Rs~G~~ALV 216 (708)
T KOG0348 137 AFASLGLHPHLVSHLNTKMKISAPTSVQKQAIPVLLEGRDALVRAQTGSGKTLAYLLPIVQSLQAMEPKIQRSDGPYALV 216 (708)
T ss_pred CCHHCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEE
T ss_conf 30113777799999988745576406765020355258634788577886217999999999972686555568834899
Q ss_pred ECCCHHHHHHHHHHHHHHHHHCCCEE-EEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHH-CCCCCCCCCEEEEEECC
Q ss_conf 84998999999999999854469879-99988998799999612897599822310133210-00122464318999613
Q gi|254780601|r 80 IAPTRELAVQVGRELEWLYAKTGVVV-AVCIGGVSVHRERRDLQNGAHIVVGTPGRLCDHIR-GKGLNISHLKAVVLDEA 157 (573)
Q Consensus 80 l~PTrELa~Qv~~~~~~l~~~~~~~v-~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl~d~~~-~~~l~l~~v~~lVlDEa 157 (573)
T Consensus 217 ivPTREL~~Q~y~~~qKLl~~~hWIVPg~lmGGEkkKSEKARLRKGiNILIgTPGRLvDHLknT~~i~~s~LRwlVlDEa 296 (708)
T KOG0348 217 IVPTRELALQIYETVQKLLKPFHWIVPGVLMGGEKKKSEKARLRKGINILIGTPGRLVDHLKNTKSIKFSRLRWLVLDEA 296 (708)
T ss_pred EECHHHHHHHHHHHHHHHHCCCEEEEECEEECCCCCCCHHHHHHCCCEEEECCCHHHHHHHHCCCHHEEEEEEEEEECCH
T ss_conf 80419999999999998725743773021223633101788875485489758427889874300221003568985343
Q ss_pred CCCCCCHHHHHHHHHHHHC-------------CCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCC-----------
Q ss_conf 1100100123578887521-------------4334225631111222001111210123333233323-----------
Q gi|254780601|r 158 DEMLDLGFRDDIEFILDSS-------------PKKRRMLMFSATISPAITTLAKNYQKDAVRVNIASEN----------- 213 (573)
Q Consensus 158 D~ml~~gf~~~i~~i~~~~-------------p~~~q~~l~SAT~~~~i~~l~~~~~~~p~~i~~~~~~----------- 213 (573)
T Consensus 297 DrlleLGfekdit~Il~~v~~~~~~e~~~~~lp~q~q~mLlSATLtd~V~rLa~~sLkDpv~I~ld~s~~~~~p~~~a~~ 376 (708)
T KOG0348 297 DRLLELGFEKDITQILKAVHSIQNAECKDPKLPHQLQNMLLSATLTDGVNRLADLSLKDPVYISLDKSHSQLNPKDKAVQ 376 (708)
T ss_pred HHHHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCHHHHH
T ss_conf 67876243003999999875002001025566378776766655677788876331568556404301220386314566
Q ss_pred --------------CCCCCCCHHCCCCCCCHHHHHHHHCC----CCCCCCEEEEECCCHHHHHHHHHHHHHC--------
Q ss_conf --------------25665200000000000245542001----0235641677513023345655555422--------
Q gi|254780601|r 214 --------------RQHSDIDYRAVLVALSDRDNAIVNIL----RYHGAKNAIVFCSTRASVSRFTKVLAEH-------- 267 (573)
Q Consensus 214 --------------~~~~~i~~~~~~v~~~~k~~~l~~ll----~~~~~~~~ivF~~t~~~~~~l~~~L~~~-------- 267 (573)
T Consensus 377 ev~~~~~~~~l~~~~iPeqL~qry~vVPpKLRLV~Laa~L~~~~k~~~~qk~iVF~S~~d~VeFHy~lf~~~l~~~~e~~ 456 (708)
T KOG0348 377 EVDDGPAGDKLDSFAIPEQLLQRYTVVPPKLRLVALAALLLNKVKFEEKQKMIVFFSCSDSVEFHYSLFSEALLSHLEGS 456 (708)
T ss_pred HCCCCCCCCCCCCCCCCHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 33775345632012386876500685287410899999999986544423069999632578999999986540232366
Q ss_pred -------C-------CCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHC
Q ss_conf -------6-------66301048999999999986654488149985386500145788733897058874789998603
Q gi|254780601|r 268 -------L-------FQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSG 333 (573)
Q Consensus 268 -------g-------~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~~v~~Vin~d~P~~~~~yvHR~G 333 (573)
T Consensus 457 s~~~~s~g~~~l~~~~k~~rLHGsm~QeeRts~f~~Fs~~~~~VLLcTDVAaRGLDlP~V~~vVQYd~P~s~adylHRvG 536 (708)
T KOG0348 457 SGAPDSEGLPPLFMDLKFYRLHGSMEQEERTSVFQEFSHSRRAVLLCTDVAARGLDLPHVGLVVQYDPPFSTADYLHRVG 536 (708)
T ss_pred CCCCCCCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 67866679810331463788427434889999987530354427885034542688877676998279998899999840
Q ss_pred CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 01037888602564059999999999998506641056
Q gi|254780601|r 334 RTGRAGRKGMSVFVIPQNMQRRAERLFREANVSVVWEP 371 (573)
Q Consensus 334 RtgRag~~G~ai~l~~~~e~~~~~~i~~~~~~~~~~~~ 371 (573)
T Consensus 537 RTARaG~kG~alLfL~P~Eaey~~~l~~~~~~-l~q~~ 573 (708)
T KOG0348 537 RTARAGEKGEALLFLLPSEAEYVNYLKKHHIM-LLQFD 573 (708)
T ss_pred HHHHCCCCCCEEEEECCCHHHHHHHHHHHCCH-HHCCC
T ss_conf 45434677715788665179999988750223-43263