HHsearch alignment for GI: 254780601 and conserved domain: KOG0352
>KOG0352 consensus.
Probab=99.97 E-value=1e-29 Score=218.96 Aligned_cols=330 Identities=23% Similarity=0.291 Sum_probs=235.8
Q ss_pred HHHHHHHHH-CCCCC-CCHHHHHHHHHHHCC-CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHH
Q ss_conf 899999997-87987-898999999999759-969999289874689999999998610421225568827999849989
Q gi|254780601|r 9 QVIGEALSE-RGYVN-LTSVQEAILNPDLRE-KDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRE 85 (573)
Q Consensus 9 ~~l~~~l~~-~g~~~-pt~iQ~~~ip~~l~g-~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrE 85 (573)
T Consensus 5 r~VreaLKK~FGh~kFKs~LQE~A~~c~VK~k~DVyVsMPTGaGKSLCyQLPaL~~~-----------g-ITIV~SPLiA 72 (641)
T KOG0352 5 RKVREALKKLFGHKKFKSRLQEQAINCIVKRKCDVYVSMPTGAGKSLCYQLPALVHG-----------G-ITIVISPLIA 72 (641)
T ss_pred HHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCHHHHHC-----------C-EEEEECHHHH
T ss_conf 799999999708301037578998999883467379964688760145426587728-----------8-1899307899
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH---HHC---CCCEEEEECCCCHH-----HHHHCCCCCCCCCEEEEE
Q ss_conf 9999999999985446987999988998799999---612---89759982231013-----321000122464318999
Q gi|254780601|r 86 LAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERR---DLQ---NGAHIVVGTPGRLC-----DHIRGKGLNISHLKAVVL 154 (573)
Q Consensus 86 La~Qv~~~~~~l~~~~~~~v~~~~gg~~~~~q~~---~l~---~~~~iiv~TPgrl~-----d~~~~~~l~l~~v~~lVl 154 (573)
T Consensus 73 L---IkDQiDHL~-~LKVp~~SLNSKlSt~ER~ri~~DL~~ekp~~K~LYITPE~AAt~~FQ~lLn-~L~~r~~L~Y~vV 147 (641)
T KOG0352 73 L---IKDQIDHLK-RLKVPCESLNSKLSTVERSRIMGDLAKEKPTIKMLYITPEGAATDGFQKLLN-GLANRDVLRYIVV 147 (641)
T ss_pred H---HHHHHHHHH-HHCCCHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHH-HHHHHCEEEEEEE
T ss_conf 9---999987787-4056166640121078899998888743775148997631555666899999-8874140224773
Q ss_pred ECCCCCCCCH--HHHHHHHH---HHHCCCCCCEEEEECCCCCCCHH-HH-HHHCCCCCCCCCCCCCCCCCCCCHHCCCCC
Q ss_conf 6131100100--12357888---75214334225631111222001-11-121012333323332325665200000000
Q gi|254780601|r 155 DEADEMLDLG--FRDDIEFI---LDSSPKKRRMLMFSATISPAITT-LA-KNYQKDAVRVNIASENRQHSDIDYRAVLVA 227 (573)
Q Consensus 155 DEaD~ml~~g--f~~~i~~i---~~~~p~~~q~~l~SAT~~~~i~~-l~-~~~~~~p~~i~~~~~~~~~~~i~~~~~~v~ 227 (573)
T Consensus 148 DEAHCVSQWGHDFRPDYL~LG~LRS~~~-~vpwvALTATA~~~VqEDi~~qL~L~~PVAiFkTP~FR-----~NLFYD~~ 221 (641)
T KOG0352 148 DEAHCVSQWGHDFRPDYLTLGSLRSVCP-GVPWVALTATANAKVQEDIAFQLKLRNPVAIFKTPTFR-----DNLFYDNH 221 (641)
T ss_pred CHHHHHHHHCCCCCCCHHHHHHHHHHCC-CCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHCCCCHH-----HHHHHHHH
T ss_conf 3466677626666820444666774469-99669854346776779999997605854440574145-----44457888
Q ss_pred C----CHHHHHHHHC----CC-------CCCC--CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 0----0024554200----10-------2356--4167751302334565555542266630104899999999998665
Q gi|254780601|r 228 L----SDRDNAIVNI----LR-------YHGA--KNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMM 290 (573)
Q Consensus 228 ~----~~k~~~l~~l----l~-------~~~~--~~~ivF~~t~~~~~~l~~~L~~~g~~~~~lhg~~~q~~R~~~~~~f 290 (573)
T Consensus 222 ~K~~I~D~~~~LaDF~~~~LG~~~~~~~~~K~~~GCGIVYCRTR~~cEq~AI~l~~~Gi~A~AYHAGLK~~ERTeVQe~W 301 (641)
T KOG0352 222 MKSFITDCLTVLADFSSSNLGKHEKASQNKKTFTGCGIVYCRTRNECEQVAIMLEIAGIPAMAYHAGLKKKERTEVQEKW 301 (641)
T ss_pred HHHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH
T ss_conf 88764137778999999862890444117877777327996028899989887532476267765001411268899998
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHH
Q ss_conf 44881499853865001457887338970588747899986030103788860256405999999999999
Q gi|254780601|r 291 RDGRARVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNMQRRAERLFR 361 (573)
Q Consensus 291 r~g~~~vLV~TDvaaRGiDi~~v~~Vin~d~P~~~~~yvHR~GRtgRag~~G~ai~l~~~~e~~~~~~i~~ 361 (573)
T Consensus 302 M~~~~PvI~AT~SFGMGVDKp~VRFViHW~~~qn~AgYYQESGRAGRDGk~SyCRLYYsR~D~~~i~FLi~ 372 (641)
T KOG0352 302 MNNEIPVIAATVSFGMGVDKPDVRFVIHWSPSQNLAGYYQESGRAGRDGKRSYCRLYYSRQDKNALNFLVS 372 (641)
T ss_pred HCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHH
T ss_conf 62788779996024446687761599951705657899886153566777252013332140577779977