HHsearch alignment for GI: 254780601 and conserved domain: KOG0354
>KOG0354 consensus.
Probab=100.00 E-value=3.6e-30 Score=222.06 Aligned_cols=328 Identities=24% Similarity=0.328 Sum_probs=211.4
Q ss_pred CCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 79878989999999997599699992898746899999999986104212255688279998499899999999999985
Q gi|254780601|r 19 GYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLY 98 (573)
Q Consensus 19 g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~ 98 (573)
T Consensus 59 ~~~~lR~YQ~eivq~AL-gkNtii~lPTG~GKTfIAa~Vm~nh~rw~p~-------~KiVF~aP~~pLv~QQ~a~~~~~~ 130 (746)
T KOG0354 59 TNLELRNYQEELVQPAL-GKNTIIALPTGSGKTFIAAVIMKNHFEWRPK-------GKVVFLAPTRPLVNQQIACFSIYL 130 (746)
T ss_pred CCCCCCHHHHHHHHHHH-CCCEEEEEECCCCCCCHHHHHHHHHHHCCCC-------CEEEEEECCCHHHHHHHHHHHHCC
T ss_conf 76656078999867862-6876999535998610479999999723776-------438996077117888898876206
Q ss_pred HHCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCC-CCCCEEEEEECCCCCCCC-HHHHHHHHHHHHC
Q ss_conf 44698799998899879999961289759982231013321000122-464318999613110010-0123578887521
Q gi|254780601|r 99 AKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRLCDHIRGKGLN-ISHLKAVVLDEADEMLDL-GFRDDIEFILDSS 176 (573)
Q Consensus 99 ~~~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~-l~~v~~lVlDEaD~ml~~-gf~~~i~~i~~~~ 176 (573)
T Consensus 131 ~~--~~~T~~l~~~~~~~~r~~i~~s~~vff~TpQil~ndL~~~~~~~ls~fs~iv~DE~Hra~kn~~Y~~Vmr~~l~~k 208 (746)
T KOG0354 131 IP--YSVTGQLGDTVPRSNRGEIVASKRVFFRTPQILENDLKSGLHDELSDFSLIVFDECHRTSKNHPYNNIMREYLDLK 208 (746)
T ss_pred CC--CCCEEECCCCCCCCCHHHHHCCCCEEEECHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 76--0104550575688762453102635896727634332543345455179999722244555661799999999865
Q ss_pred CCCCCEEEEECCCCCCCHH-------H-------------------------------------------HHHHCCCC--
Q ss_conf 4334225631111222001-------1-------------------------------------------11210123--
Q gi|254780601|r 177 PKKRRMLMFSATISPAITT-------L-------------------------------------------AKNYQKDA-- 204 (573)
Q Consensus 177 p~~~q~~l~SAT~~~~i~~-------l-------------------------------------------~~~~~~~p-- 204 (573)
T Consensus 209 ~~~~qILgLTASpG~~~~~v~~~I~~L~asldvr~~ssi~~~y~~lr~~~~i~v~~~~~~~~~~~~f~~~i~p~l~~l~~ 288 (746)
T KOG0354 209 NQGNQILGLTASPGSKLEQVQNVIDNLCASLDVRTESSIKSNYEELREHVQIPVDLSLCERDIEDPFGMIIEPLLQQLQE 288 (746)
T ss_pred HCCCCEEEEECCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 14661799855888458999999985203325550445654189872467524758876411343699999999999986
Q ss_pred -CCCCCCC------------CCCCCCCC--CHH--CC-------------------------------------------
Q ss_conf -3332333------------23256652--000--00-------------------------------------------
Q gi|254780601|r 205 -VRVNIAS------------ENRQHSDI--DYR--AV------------------------------------------- 224 (573)
Q Consensus 205 -~~i~~~~------------~~~~~~~i--~~~--~~------------------------------------------- 224 (573)
T Consensus 289 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~f~~~~~~~~~~~ll~~~gir~~~~l~~~~~f~~e~~~~k~~~~~~ 368 (746)
T KOG0354 289 EGLIEISDKSTSYEQWVVQAEKAAAPNGPENQRNCFYALHLRKYNLALLISDGIRFVDALDYLEDFYEEVALKKYLKLEL 368 (746)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 38541024333444404330022236887432036789999987888876323403777765554300000467889874
Q ss_pred -------------------CCC--CCHHHHHHHHCC----CCCCCCEEEEECCCHHHHHHHHHHHHH---CCCCCCCCCC
Q ss_conf -------------------000--000245542001----023564167751302334565555542---2666301048
Q gi|254780601|r 225 -------------------LVA--LSDRDNAIVNIL----RYHGAKNAIVFCSTRASVSRFTKVLAE---HLFQVVALSG 276 (573)
Q Consensus 225 -------------------~v~--~~~k~~~l~~ll----~~~~~~~~ivF~~t~~~~~~l~~~L~~---~g~~~~~lhg 276 (573)
T Consensus 369 e~~~~~~~~~~m~~~~~l~~~~~~~npkle~l~~~l~e~f~~~~dsR~IIFve~R~sa~~l~~~l~~~~~~~ir~~~fiG 448 (746)
T KOG0354 369 EARLIRNFTENMNELEHLSLDPPKENPKLEKLVEILVEQFEQNPDSRTIIFVETRESALALKKWLLQLHELGIKAEIFIG 448 (746)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 22106778898876443202787668469999999999860598850799973288999999999754013544021560
Q ss_pred --------CCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEE
Q ss_conf --------999999999986654488149985386500145788733897058874789998603010378886025640
Q gi|254780601|r 277 --------ELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVI 348 (573)
Q Consensus 277 --------~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~~v~~Vin~d~P~~~~~yvHR~GRtgRag~~G~ai~l~ 348 (573)
T Consensus 449 q~~s~~~~gmtqk~Q~evl~~Fr~G~~NvLVATSV~EEGLDI~ec~lVIcYd~~snpIrmIQrrGR-gRa-~ns~~vll~ 526 (746)
T KOG0354 449 QGKSTQSTGMTQKEQKEVLDKFRDGEINVLVATSVAEEGLDIGECNLVICYDYSSNPIRMVQRRGR-GRA-RNSKCVLLT 526 (746)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCEEEEECCCCCHHHHHHHHCC-CCC-CCCEEEEEE
T ss_conf 354454444578999999999857980279981010046774211289996577668899998631-010-187699997
Q ss_pred CHHHHHHHHH
Q ss_conf 5999999999
Q gi|254780601|r 349 PQNMQRRAER 358 (573)
Q Consensus 349 ~~~e~~~~~~ 358 (573)
T Consensus 527 t~~~~~~~E~ 536 (746)
T KOG0354 527 TGSEVIEFER 536 (746)
T ss_pred CCHHHHHHHH
T ss_conf 2516889988