HHsearch alignment for GI: 254780601 and conserved domain: KOG0384
>KOG0384 consensus.
Probab=99.29 E-value=3.3e-09 Score=81.09 Aligned_cols=310 Identities=20% Similarity=0.263 Sum_probs=182.7
Q ss_pred CCCCHHHHHHHHHHH----CCCCEEEECCCCCCHHH---HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 878989999999997----59969999289874689---99999999861042122556882799984998999999999
Q gi|254780601|r 21 VNLTSVQEAILNPDL----REKDVLVSAQTGSGKTV---AFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRE 93 (573)
Q Consensus 21 ~~pt~iQ~~~ip~~l----~g~d~i~~a~TGsGKT~---af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~ 93 (573)
T Consensus 369 ~~LRDYQLeGlNWLl~~W~k~~n~ILADEMGLGKTvQtI~FLs~l~~~~--------~~~GPf-LvVvPLSTi~~W-~re 438 (1373)
T KOG0384 369 NELRDYQLEGLNWLLYSWYKRNNCILADEMGLGKTVQTITFLSYLFHSL--------QIHGPF-LVVVPLSTITAW-ERE 438 (1373)
T ss_pred CCHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHC--------CCCCCE-EEEEECCCCHHH-HHH
T ss_conf 6144656313289999886468647540025774013459999999845--------447886-999864000789-999
Q ss_pred HHHHHHHCCCEEEEEECCCCHHHHH-HH----HCC-----CCEEEEECCCCHHHHHHCCCCCCCCC--EEEEEECCCCCC
Q ss_conf 9998544698799998899879999-96----128-----97599822310133210001224643--189996131100
Q gi|254780601|r 94 LEWLYAKTGVVVAVCIGGVSVHRER-RD----LQN-----GAHIVVGTPGRLCDHIRGKGLNISHL--KAVVLDEADEML 161 (573)
Q Consensus 94 ~~~l~~~~~~~v~~~~gg~~~~~q~-~~----l~~-----~~~iiv~TPgrl~d~~~~~~l~l~~v--~~lVlDEaD~ml 161 (573)
T Consensus 439 f~~Wt---dmN~ivY~G~-~~SR~~I~qYE~~~~~~~~~~KFn~LlTTyE~vL----kDk~~L~~i~W~~~~vDEAHRLK 510 (1373)
T KOG0384 439 FETWT---DMNVIVYHGN-LESRQLIRQYEFYHSSNTKKLKFNALLTTYEIVL----KDKAELSKIPWRYLLVDEAHRLK 510 (1373)
T ss_pred HHHHH---HCCEEEEECC-HHHHHHHHHHHEEECCCCCEEEEEEEEHHHHHHH----CCHHHHCCCCEEEEEECHHHHHC
T ss_conf 99875---1465888266-5678999876504547775178876400189897----26888645752789741665506
Q ss_pred CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH----------------------------------------------
Q ss_conf 1001235788875214334225631111222001----------------------------------------------
Q gi|254780601|r 162 DLGFRDDIEFILDSSPKKRRMLMFSATISPAITT---------------------------------------------- 195 (573)
Q Consensus 162 ~~gf~~~i~~i~~~~p~~~q~~l~SAT~~~~i~~---------------------------------------------- 195 (573)
T Consensus 511 N~~--s~Ly~~L~~f~~~hrlLiTGTPLQNsi~EL~sLL~Fl~P~kF~~~~ef~~e~~~~~e~~v~~Lq~~L~P~~LRRl 588 (1373)
T KOG0384 511 NDE--SKLYESLNQFKMNHRLLITGTPLQNSLKELWSLLHFLMPGKFDSWDEFLEEFDEETEEQVRKLQQILKPFLLRRL 588 (1373)
T ss_pred CCH--HHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 504--489999998643075775478540319999999877375557867899887330238899999998768999998
Q ss_pred ----------------------HHHHHC-----CCCCCCCCCCCCCCCCC---C--------CHHCCCCC----------
Q ss_conf ----------------------111210-----12333323332325665---2--------00000000----------
Q gi|254780601|r 196 ----------------------LAKNYQ-----KDAVRVNIASENRQHSD---I--------DYRAVLVA---------- 227 (573)
Q Consensus 196 ----------------------l~~~~~-----~~p~~i~~~~~~~~~~~---i--------~~~~~~v~---------- 227 (573)
T Consensus 589 KkDVEKSLp~K~E~IlrVels~lQk~yYk~ILtkN~~~LtkG~~g~~-~~llNimmELkKccNHpyLi~gaee~~~~~~~ 667 (1373)
T KOG0384 589 KKDVEKSLPPKEETILRVELSDLQKQYYKAILTKNFSALTKGAKGST-PSLLNIMMELKKCCNHPYLIKGAEEKILGDFR 667 (1373)
T ss_pred HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 88775227863122565405678999999999853999836678898-02999999999864780004858888887653
Q ss_pred -------------CCHHHHHHHHCCC--CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf -------------0002455420010--2356416775130233456555554226663010489999999999866544
Q gi|254780601|r 228 -------------LSDRDNAIVNILR--YHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRD 292 (573)
Q Consensus 228 -------------~~~k~~~l~~ll~--~~~~~~~ivF~~t~~~~~~l~~~L~~~g~~~~~lhg~~~q~~R~~~~~~fr~ 292 (573)
T Consensus 668 ~~~~d~~l~~lI~sSGKlVLLDKLL~rLk~~GHrVLIFSQMVRmLDIL~eYL~~r~ypfQRLDGsvrgelRq~AiDhFna 747 (1373)
T KOG0384 668 DKMRDEALQALIQSSGKLVLLDKLLPRLKEGGHRVLIFSQMVRMLDILAEYLSLRGYPFQRLDGSVRGELRQQAIDHFNA 747 (1373)
T ss_pred HCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 01467999999971685886987789986189459971999999999999999738861114687616889988874369
Q ss_pred ---CCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCE--EEEEECHH
Q ss_conf ---881499853865001457887338970588747899986030103788860--25640599
Q gi|254780601|r 293 ---GRARVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGM--SVFVIPQN 351 (573)
Q Consensus 293 ---g~~~vLV~TDvaaRGiDi~~v~~Vin~d~P~~~~~yvHR~GRtgRag~~G~--ai~l~~~~ 351 (573)
T Consensus 748 p~SddFvFLLSTRAGGLGINLatADTVIIFDSDWNPQNDLQAqARaHRIGQkk~VnVYRLVTk~ 811 (1373)
T KOG0384 748 PDSDDFVFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKKHVNVYRLVTKN 811 (1373)
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf 9988649998315676640224466699968999950578999988660664547899974578