HHsearch alignment for GI: 254780601 and conserved domain: KOG0388

>KOG0388 consensus.
Probab=96.65  E-value=0.01  Score=37.48  Aligned_cols=113  Identities=20%  Similarity=0.289  Sum_probs=71.4

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH
Q ss_conf             59969999289874689999999998610421225568827999849989999999999998544698799998899879
Q gi|254780601|r   36 REKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVH  115 (573)
Q Consensus        36 ~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~~~~~v~~~~gg~~~~  115 (573)
T Consensus       585 qGiNGILADeMGLGKTVQ-sisvlAhLaE~~nI----wGPF-LVVtpaStL~NWa-qEisrFl--P~~k~lpywGs~~eR  655 (1185)
T KOG0388         585 QGINGILADEMGLGKTVQ-SISVLAHLAETHNI----WGPF-LVVTPASTLHNWA-QEISRFL--PSFKVLPYWGSPSER  655 (1185)
T ss_pred             CCCCCEEHHHHCCCHHHH-HHHHHHHHHHHCCC----CCCE-EEEEHHHHHHHHH-HHHHHHC--CCCEEECCCCCHHHH
T ss_conf             034412133304532688-99999999874458----8763-8960278776799-9999858--654243476880266


Q ss_pred             HHHHHH---------CCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCC
Q ss_conf             999961---------28975998223101332100012246431899961311
Q gi|254780601|r  116 RERRDL---------QNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADE  159 (573)
Q Consensus       116 ~q~~~l---------~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~  159 (573)
T Consensus       656 kiLrKfw~rKnmY~rna~fhVviTSYQlvV--tDeky~qkvKWQYMILDEAQA  706 (1185)
T KOG0388         656 KILRKFWNRKNMYRRNAPFHVVITSYQLVV--TDEKYLQKVKWQYMILDEAQA  706 (1185)
T ss_pred             HHHHHHCCHHHHHCCCCCCEEEEEEEEEEE--CHHHHHHHHHHHHEEHHHHHH
T ss_conf             899974044444304799528997531111--159999863345200557877