HHsearch alignment for GI: 254780601 and conserved domain: KOG0388
>KOG0388 consensus.
Probab=96.65 E-value=0.01 Score=37.48 Aligned_cols=113 Identities=20% Similarity=0.289 Sum_probs=71.4
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH
Q ss_conf 59969999289874689999999998610421225568827999849989999999999998544698799998899879
Q gi|254780601|r 36 REKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVH 115 (573)
Q Consensus 36 ~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~~~~~v~~~~gg~~~~ 115 (573)
T Consensus 585 qGiNGILADeMGLGKTVQ-sisvlAhLaE~~nI----wGPF-LVVtpaStL~NWa-qEisrFl--P~~k~lpywGs~~eR 655 (1185)
T KOG0388 585 QGINGILADEMGLGKTVQ-SISVLAHLAETHNI----WGPF-LVVTPASTLHNWA-QEISRFL--PSFKVLPYWGSPSER 655 (1185)
T ss_pred CCCCCEEHHHHCCCHHHH-HHHHHHHHHHHCCC----CCCE-EEEEHHHHHHHHH-HHHHHHC--CCCEEECCCCCHHHH
T ss_conf 034412133304532688-99999999874458----8763-8960278776799-9999858--654243476880266
Q ss_pred HHHHHH---------CCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCC
Q ss_conf 999961---------28975998223101332100012246431899961311
Q gi|254780601|r 116 RERRDL---------QNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADE 159 (573)
Q Consensus 116 ~q~~~l---------~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ 159 (573)
T Consensus 656 kiLrKfw~rKnmY~rna~fhVviTSYQlvV--tDeky~qkvKWQYMILDEAQA 706 (1185)
T KOG0388 656 KILRKFWNRKNMYRRNAPFHVVITSYQLVV--TDEKYLQKVKWQYMILDEAQA 706 (1185)
T ss_pred HHHHHHCCHHHHHCCCCCCEEEEEEEEEEE--CHHHHHHHHHHHHEEHHHHHH
T ss_conf 899974044444304799528997531111--159999863345200557877