HHsearch alignment for GI: 254780601 and conserved domain: KOG0948
>KOG0948 consensus.
Probab=99.75 E-value=1.3e-17 Score=137.70 Aligned_cols=304 Identities=23% Similarity=0.282 Sum_probs=201.2
Q ss_pred CCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 89899999999975996999928987468999999999861042122556882799984998999999999999854469
Q gi|254780601|r 23 LTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTG 102 (573)
Q Consensus 23 pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~~~ 102 (573)
T Consensus 130 LDpFQ~~aI~Cidr~eSVLVSAHTSAGKTVVAeYAIA~sLr-~k--------QRVIYTSPIKALSNQKYREl~~EF~DVG 200 (1041)
T KOG0948 130 LDPFQSTAIKCIDRGESVLVSAHTSAGKTVVAEYAIAMSLR-EK--------QRVIYTSPIKALSNQKYRELLEEFKDVG 200 (1041)
T ss_pred CCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHH-HC--------CEEEEECHHHHHCCHHHHHHHHHHCCCC
T ss_conf 48067654531127963899840578852379999999987-64--------8589607315541154899998846365
Q ss_pred CEEEEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCC--HHHHHHHHHHHHCCCCC
Q ss_conf 8799998899879999961289759982231013321000122464318999613110010--01235788875214334
Q gi|254780601|r 103 VVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDL--GFRDDIEFILDSSPKKR 180 (573)
Q Consensus 103 ~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~--gf~~~i~~i~~~~p~~~ 180 (573)
T Consensus 201 L----MTGDVT-------InP~ASCLVMTTEILRsMLYRGSEvmrEVaWVIFDEIHYMRDkERGVV-WEET-IIllP~~v 267 (1041)
T KOG0948 201 L----MTGDVT-------INPDASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDKERGVV-WEET-IILLPDNV 267 (1041)
T ss_pred E----EECCEE-------ECCCCCEEEEHHHHHHHHHHCCCHHHHEEEEEEEEEEHHCCCCCCCEE-EEEE-EEECCCCC
T ss_conf 2----305446-------689875453379999998743316755231488620010013445602-3566-78536660
Q ss_pred CEEEEECCCCCCCHHHHH---HHCCCCCCCCCCCCCCCCCCCCHH---------CCCCCCCHHH---------H------
Q ss_conf 225631111222001111---210123333233323256652000---------0000000024---------5------
Q gi|254780601|r 181 RMLMFSATISPAITTLAK---NYQKDAVRVNIASENRQHSDIDYR---------AVLVALSDRD---------N------ 233 (573)
Q Consensus 181 q~~l~SAT~~~~i~~l~~---~~~~~p~~i~~~~~~~~~~~i~~~---------~~~v~~~~k~---------~------ 233 (573)
T Consensus 268 r~VFLSATiPNA-~qFAeWI~~ihkQPcHVVYTdyRPTP--LQHyifP~ggdGlylvVDek~~FrednF~~am~~l~~~~ 344 (1041)
T KOG0948 268 RFVFLSATIPNA-RQFAEWICHIHKQPCHVVYTDYRPTP--LQHYIFPAGGDGLYLVVDEKGKFREDNFQKAMSVLRKAG 344 (1041)
T ss_pred EEEEEECCCCCH-HHHHHHHHHHHCCCCEEEEECCCCCC--CEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 389995658777-99999999975587428950587886--414453079980699970566422677999999763257
Q ss_pred ----------------------------HHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCC-------------
Q ss_conf ----------------------------542001023564167751302334565555542266630-------------
Q gi|254780601|r 234 ----------------------------AIVNILRYHGAKNAIVFCSTRASVSRFTKVLAEHLFQVV------------- 272 (573)
Q Consensus 234 ----------------------------~l~~ll~~~~~~~~ivF~~t~~~~~~l~~~L~~~g~~~~------------- 272 (573)
T Consensus 345 ~~~~~~~~~~k~~kG~~~~~~~~~s~i~kiVkmi~~~~~~PVIvFSFSkkeCE~~Alqm~kldfN~deEk~~V~~iF~nA 424 (1041)
T KOG0948 345 ESDGKKKANKKGRKGGTGGKGPGDSDIYKIVKMIMERNYLPVIVFSFSKKECEAYALQMSKLDFNTDEEKELVETIFNNA 424 (1041)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 78644455544565776788987431999999999626896699981476799999765157678856888999999999
Q ss_pred --------------------------CCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEE----ECCC
Q ss_conf --------------------------1048999999999986654488149985386500145788733897----0588
Q gi|254780601|r 273 --------------------------ALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIH----AELS 322 (573)
Q Consensus 273 --------------------------~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~~v~~Vin----~d~P 322 (573)
T Consensus 425 i~~LseeDr~LPqie~iLPLL~RGIGIHHsGLLPIlKE~IEILFqEGLvKvLFATETFsiGLNMPAkTVvFT~~rKfDG~ 504 (1041)
T KOG0948 425 IDQLSEEDRELPQIENILPLLRRGIGIHHSGLLPILKEVIEILFQEGLVKVLFATETFSIGLNMPAKTVVFTAVRKFDGK 504 (1041)
T ss_pred HHHCCHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
T ss_conf 98548533155178888999873554344550478999999998502798877541231005886405887401114786
Q ss_pred C----CHHHHHHHHCCCCCCCC--CCEEEEEECHH
Q ss_conf 7----47899986030103788--86025640599
Q gi|254780601|r 323 S----NPENLLHRSGRTGRAGR--KGMSVFVIPQN 351 (573)
Q Consensus 323 ~----~~~~yvHR~GRtgRag~--~G~ai~l~~~~ 351 (573)
T Consensus 505 ~fRwissGEYIQMSGRAGRRG~DdrGivIlmiDek 539 (1041)
T KOG0948 505 KFRWISSGEYIQMSGRAGRRGIDDRGIVILMIDEK 539 (1041)
T ss_pred CEEEECCCCEEEECCCCCCCCCCCCCEEEEEECCC
T ss_conf 40453366357741534556778775299995676