HHsearch alignment for GI: 254780601 and conserved domain: KOG0950

>KOG0950 consensus.
Probab=99.88  E-value=2e-20  Score=156.59  Aligned_cols=340  Identities=20%  Similarity=0.284  Sum_probs=221.4

Q ss_pred             CCCHHHHHH-HHHCCCCCCCHHHHHHH--HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC
Q ss_conf             998899999-99787987898999999--999759969999289874689999999998610421225568827999849
Q gi|254780601|r    6 NIPQVIGEA-LSERGYVNLTSVQEAIL--NPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAP   82 (573)
Q Consensus         6 ~l~~~l~~~-l~~~g~~~pt~iQ~~~i--p~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~P   82 (573)
T Consensus       206 ~~~~k~~~~~~~~kgi~~~fewq~ecls~~~~~e~~nliys~Pts~gktlvaeilml~~~l~~rr~--------~llilp  277 (1008)
T KOG0950         206 RLPTKVSHLYAKDKGILKLFEWQAECLSLPRLLERKNLIYSLPTSAGKTLVAEILMLREVLCRRRN--------VLLILP  277 (1008)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHC--------EEEECC
T ss_conf             384688889987644898999999871465342356558857876406799999999999887421--------167424


Q ss_pred             CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCHHHH----HHCCCCCCCCCEEEEEECCC
Q ss_conf             98999999999999854469879999889987999996128975998223101332----10001224643189996131
Q gi|254780601|r   83 TRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRLCDH----IRGKGLNISHLKAVVLDEAD  158 (573)
Q Consensus        83 TrELa~Qv~~~~~~l~~~~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl~d~----~~~~~l~l~~v~~lVlDEaD  158 (573)
T Consensus       278 ~vsiv~Ek~~~l~~~~~~~G~~ve~y~g~~~p~~----~~k~~sv~i~tiEkanslin~lie~g--~~~~~g~vvVdElh  351 (1008)
T KOG0950         278 YVSIVQEKISALSPFSIDLGFPVEEYAGRFPPEK----RRKRESVAIATIEKANSLINSLIEQG--RLDFLGMVVVDELH  351 (1008)
T ss_pred             EEEHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCC----CCCCEEEEEEEHHHHHHHHHHHHHCC--CCCCCCCEEEEEEE
T ss_conf             2102587776400220335886221126689988----64410455420376676888887617--83304728975224


Q ss_pred             CCCCCHHHHHHHHHHHHC-----CCCCCEEEEECCCCCCCHHHHHHHCCC--------CCCCC----CCCCCCC------
Q ss_conf             100100123578887521-----433422563111122200111121012--------33332----3332325------
Q gi|254780601|r  159 EMLDLGFRDDIEFILDSS-----PKKRRMLMFSATISPAITTLAKNYQKD--------AVRVN----IASENRQ------  215 (573)
Q Consensus       159 ~ml~~gf~~~i~~i~~~~-----p~~~q~~l~SAT~~~~i~~l~~~~~~~--------p~~i~----~~~~~~~------  215 (573)
T Consensus       352 mi~d~~rg~~lE~~l~k~~y~~~~~~~~iIGMSATi~N~--~lL~~~L~A~~y~t~fRPv~L~E~ik~G~~i~~~~r~~~  429 (1008)
T KOG0950         352 MIGDKGRGAILELLLAKILYENLETSVQIIGMSATIPNN--SLLQDWLDAFVYTTRFRPVPLKEYIKPGSLIYESSRNKV  429 (1008)
T ss_pred             EEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCH--HHHHHHHHHHHEECCCCCCCCHHCCCCCCCCCCCHHHHH
T ss_conf             640356355899999999996325634676552414774--889988643232046676430103677763012305677


Q ss_pred             CCCCCHHCCCCCCCHHHHHHHHCCC--CCCCCEEEEECCCHHHHHHHHHHHHHC--------------------------
Q ss_conf             6652000000000002455420010--235641677513023345655555422--------------------------
Q gi|254780601|r  216 HSDIDYRAVLVALSDRDNAIVNILR--YHGAKNAIVFCSTRASVSRFTKVLAEH--------------------------  267 (573)
Q Consensus       216 ~~~i~~~~~~v~~~~k~~~l~~ll~--~~~~~~~ivF~~t~~~~~~l~~~L~~~--------------------------  267 (573)
T Consensus       430 lr~ia~l~~~~~g~~dpD~~v~L~tet~~e~~~~lvfc~sk~~ce~~a~~~~~~vpk~~~~e~~~~~~~~~s~s~~lr~~  509 (1008)
T KOG0950         430 LREIANLYSSNLGDEDPDHLVGLCTETAPEGSSVLVFCPSKKNCENVASLIAKKVPKHIKSEKRLGLWELLSISNLLRRI  509 (1008)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             77754322220256797554421254652587179975764334778888988726766556654577788887576407


Q ss_pred             ------------CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECC----CCCHHHHHHH
Q ss_conf             ------------666301048999999999986654488149985386500145788733897058----8747899986
Q gi|254780601|r  268 ------------LFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIHAEL----SSNPENLLHR  331 (573)
Q Consensus       268 ------------g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~~v~~Vin~d~----P~~~~~yvHR  331 (573)
T Consensus       510 ~~~ld~Vl~~ti~~GvAyHhaGLT~eER~~iE~afr~g~i~vl~aTSTlaaGVNLPArRVIiraP~~g~~~l~~~~YkQM  589 (1008)
T KOG0950         510 PGILDPVLAKTIPYGVAYHHAGLTSEEREIIEAAFREGNIFVLVATSTLAAGVNLPARRVIIRAPYVGREFLTRLEYKQM  589 (1008)
T ss_pred             CCCCCHHHHEECCCCCEECCCCCCCCHHHHHHHHHHHCCEEEEEECCHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHH
T ss_conf             75445387602003533034446500688899999746769999434464068687511587477546230002467765


Q ss_pred             HCCCCCCCC--CCEEEEEECHHHHHHHHHHHH
Q ss_conf             030103788--860256405999999999999
Q gi|254780601|r  332 SGRTGRAGR--KGMSVFVIPQNMQRRAERLFR  361 (573)
Q Consensus       332 ~GRtgRag~--~G~ai~l~~~~e~~~~~~i~~  361 (573)
T Consensus       590 ~GRAGR~gidT~GdsiLI~k~~e~~~~~~lv~  621 (1008)
T KOG0950         590 VGRAGRTGIDTLGDSILIIKSSEKKRVRELVN  621 (1008)
T ss_pred             HHHHHHCCCCCCCCEEEEEECCCHHHHHHHHH
T ss_conf             30200033465765589850333567788871