HHsearch alignment for GI: 254780601 and conserved domain: PRK04195
>PRK04195 replication factor C large subunit; Provisional.
Probab=95.35 E-value=0.11 Score=30.48 Aligned_cols=38 Identities=26% Similarity=0.340 Sum_probs=21.6
Q ss_pred CCEEEEEECCCCCCC---CHHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 431899961311001---00123578887521433422563111
Q gi|254780601|r 148 HLKAVVLDEADEMLD---LGFRDDIEFILDSSPKKRRMLMFSAT 188 (573)
Q Consensus 148 ~v~~lVlDEaD~ml~---~gf~~~i~~i~~~~p~~~q~~l~SAT 188 (573)
T Consensus 99 ~~KlIIlDEvD~l~~~~d~gg~~al~~~ik---~s~~PiIli~N 139 (403)
T PRK04195 99 KRKLILLDEVDGIHGNADRGGVRAILEIIK---KAKNPIILTAN 139 (403)
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHH---CCCCEEEEEEC
T ss_conf 734999634344572444799999999985---48870899826