HHsearch alignment for GI: 254780601 and conserved domain: PRK05298

>PRK05298 excinuclease ABC subunit B; Provisional.
Probab=99.89  E-value=1e-19  Score=151.85  Aligned_cols=131  Identities=18%  Similarity=0.296  Sum_probs=109.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEC
Q ss_conf             23564167751302334565555542266630104899999999998665448814998538650014578873389705
Q gi|254780601|r  241 YHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIHAE  320 (573)
Q Consensus       241 ~~~~~~~ivF~~t~~~~~~l~~~L~~~g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~~v~~Vin~d  320 (573)
T Consensus       443 ~~~~er~LvttlTkkmaEdLt~yl~~~~ik~~YlHs~i~t~eR~eIl~~LR~G~~DVlVGINLLREGLDlPEVSLVaILD  522 (657)
T PRK05298        443 VAKGERVLVTTLTKRMAEDLTDYLKELGIKVRYLHSDIDTLERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILD  522 (657)
T ss_pred             HHCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCEEEEEEEE
T ss_conf             63697699995459899999999996798079962666188999999998588875897500220457876135798870


Q ss_pred             CC-----CCHHHHHHHHCCCCCCCCCCEEEEEE---CHH--------HHHHHHHHHHHHHCCCCCCCC
Q ss_conf             88-----74789998603010378886025640---599--------999999999985066410568
Q gi|254780601|r  321 LS-----SNPENLLHRSGRTGRAGRKGMSVFVI---PQN--------MQRRAERLFREANVSVVWEPA  372 (573)
Q Consensus       321 ~P-----~~~~~yvHR~GRtgRag~~G~ai~l~---~~~--------e~~~~~~i~~~~~~~~~~~~~  372 (573)
T Consensus       523 ADKeGFLRs~~SLiQtiGRAAR-N~~G~vIlYAD~iT~SM~~ai~ET~rRR~iQ~~yN~~h~ItP~tI  589 (657)
T PRK05298        523 ADKEGFLRSERSLIQTIGRAAR-NVNGKVILYADKITDSMQKAIDETERRREIQIAYNEEHGITPKTI  589 (657)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHH-CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             6852210352059999878862-579749998154509999999999989999999999569986431