HHsearch alignment for GI: 254780601 and conserved domain: PRK05298
>PRK05298 excinuclease ABC subunit B; Provisional.
Probab=99.89 E-value=1e-19 Score=151.85 Aligned_cols=131 Identities=18% Similarity=0.296 Sum_probs=109.5
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEC
Q ss_conf 23564167751302334565555542266630104899999999998665448814998538650014578873389705
Q gi|254780601|r 241 YHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIHAE 320 (573)
Q Consensus 241 ~~~~~~~ivF~~t~~~~~~l~~~L~~~g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~~v~~Vin~d 320 (573)
T Consensus 443 ~~~~er~LvttlTkkmaEdLt~yl~~~~ik~~YlHs~i~t~eR~eIl~~LR~G~~DVlVGINLLREGLDlPEVSLVaILD 522 (657)
T PRK05298 443 VAKGERVLVTTLTKRMAEDLTDYLKELGIKVRYLHSDIDTLERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILD 522 (657)
T ss_pred HHCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCEEEEEEEE
T ss_conf 63697699995459899999999996798079962666188999999998588875897500220457876135798870
Q ss_pred CC-----CCHHHHHHHHCCCCCCCCCCEEEEEE---CHH--------HHHHHHHHHHHHHCCCCCCCC
Q ss_conf 88-----74789998603010378886025640---599--------999999999985066410568
Q gi|254780601|r 321 LS-----SNPENLLHRSGRTGRAGRKGMSVFVI---PQN--------MQRRAERLFREANVSVVWEPA 372 (573)
Q Consensus 321 ~P-----~~~~~yvHR~GRtgRag~~G~ai~l~---~~~--------e~~~~~~i~~~~~~~~~~~~~ 372 (573)
T Consensus 523 ADKeGFLRs~~SLiQtiGRAAR-N~~G~vIlYAD~iT~SM~~ai~ET~rRR~iQ~~yN~~h~ItP~tI 589 (657)
T PRK05298 523 ADKEGFLRSERSLIQTIGRAAR-NVNGKVILYADKITDSMQKAIDETERRREIQIAYNEEHGITPKTI 589 (657)
T ss_pred CCCCCCCCCCCHHHHHHHHHHH-CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 6852210352059999878862-579749998154509999999999989999999999569986431