HHsearch alignment for GI: 254780601 and conserved domain: PRK05896
>PRK05896 DNA polymerase III subunits gamma and tau; Validated.
Probab=90.04 E-value=1.4 Score=23.02 Aligned_cols=118 Identities=19% Similarity=0.151 Sum_probs=52.5
Q ss_pred CCEEEECCCCCCHHH-HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH-H
Q ss_conf 969999289874689-99999999861042122556882799984998999999999999854469879999889987-9
Q gi|254780601|r 38 KDVLVSAQTGSGKTV-AFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSV-H 115 (573)
Q Consensus 38 ~d~i~~a~TGsGKT~-af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~~~~~v~~~~gg~~~-~ 115 (573)
T Consensus 39 HAYLFsGPrGvGKTTlArifAka--LnC~~~~~---~dp-----Cg~-------C~sC~~I~~g~h~DviEIdaasn~gI 101 (613)
T PRK05896 39 HAYIFSGPRGIGKTSIAKIFAKA--INCLNPKD---GDC-----CNS-------CSVCESINTNQSVDIVELDAASNNGV 101 (613)
T ss_pred CEEEEECCCCCCHHHHHHHHHHH--HCCCCCCC---CCC-----CCC-------CHHHHHHHCCCCCCEEEEECCCCCCH
T ss_conf 22775589984889999999999--66999999---998-----888-------87899985699998688406555788
Q ss_pred HHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC--CCCCCEEEEECCCCC
Q ss_conf 9999612897599822310133210001224643189996131100100123578887521--433422563111122
Q gi|254780601|r 116 RERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSS--PKKRRMLMFSATISP 191 (573)
Q Consensus 116 ~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~~~i~~i~~~~--p~~~q~~l~SAT~~~ 191 (573)
T Consensus 102 DeIReLie~--------------~~~~P-~~gkyKV~IIDEah~Ln~~----AaNALLKtLEEPP~~viFIL~Ttep~ 160 (613)
T PRK05896 102 DEIRNIIDN--------------INYLP-TTFKYKVYIIDEAHMLSTS----AWNALLKTLEEPPKHVVFIFATTEFQ 160 (613)
T ss_pred HHHHHHHHH--------------HCCCC-CCCCCEEEEECCHHHCCHH----HHHHHHHHCCCCCCCCEEEEEECCHH
T ss_conf 999999997--------------08587-5799459998162217999----99999985348987837999828815