HHsearch alignment for GI: 254780601 and conserved domain: PRK06090
>PRK06090 DNA polymerase III subunit delta'; Validated.
Probab=90.28 E-value=1.4 Score=23.15 Aligned_cols=117 Identities=15% Similarity=0.165 Sum_probs=55.5
Q ss_pred CCEEEECCCCCCHHH-HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH--HHHCCCEEEE-EECCCC
Q ss_conf 969999289874689-999999998610421225568827999849989999999999998--5446987999-988998
Q gi|254780601|r 38 KDVLVSAQTGSGKTV-AFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWL--YAKTGVVVAV-CIGGVS 113 (573)
Q Consensus 38 ~d~i~~a~TGsGKT~-af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l--~~~~~~~v~~-~~gg~~ 113 (573)
T Consensus 26 HA~L~~g~~G~Gk~~la~~--la~~LlC~~~~~~----~-----------Cg~-C~sC~l~~~g~HPD~~~i~pe~~~k~ 87 (319)
T PRK06090 26 GALLLQSDEGLGVESLVEL--FSHALLCQNYQSE----A-----------CGF-CHSCELMKSGNHPDLHVIKPEKEGKS 87 (319)
T ss_pred CEEEEECCCCCCHHHHHHH--HHHHHHCCCCCCC----C-----------CCC-CHHHHHHHCCCCCCCEEEECCCCCCC
T ss_conf 0676679998579999999--9999808999999----8-----------877-87799987589998236612335676
Q ss_pred H-HHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC--CCCCCEEEEECCCC
Q ss_conf 7-99999612897599822310133210001224643189996131100100123578887521--43342256311112
Q gi|254780601|r 114 V-HRERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSS--PKKRRMLMFSATIS 190 (573)
Q Consensus 114 ~-~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~~~i~~i~~~~--p~~~q~~l~SAT~~ 190 (573)
T Consensus 88 I~vd~IR~l~--------------~~~~~~-~~~g~~KV~iI~~ae~m~~----~AaNALLKtLEEPp~~t~fiL~t~~~ 148 (319)
T PRK06090 88 ITVEQIRQCN--------------RLAQES-SQLGGYRLFVIEPADAMNE----SASNALLKTLEEPAPNCLFLLVTHNQ 148 (319)
T ss_pred CCHHHHHHHH--------------HHHHHC-CCCCCCEEEEECCHHHCCH----HHHHHHHHHHCCCCCCEEEEEEECCH
T ss_conf 8799999999--------------997545-2106936999814443499----99999999842899883899876851
Q ss_pred C
Q ss_conf 2
Q gi|254780601|r 191 P 191 (573)
Q Consensus 191 ~ 191 (573)
T Consensus 149 ~ 149 (319)
T PRK06090 149 K 149 (319)
T ss_pred H
T ss_conf 2