HHsearch alignment for GI: 254780601 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=91.06 E-value=0.26 Score=28.01 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=26.6
Q ss_pred HHHHCCCCCCCHHHHHHHHH------HHCCCCEEEECCCCCCHHH
Q ss_conf 99978798789899999999------9759969999289874689
Q gi|254780601|r 14 ALSERGYVNLTSVQEAILNP------DLREKDVLVSAQTGSGKTV 52 (573)
Q Consensus 14 ~l~~~g~~~pt~iQ~~~ip~------~l~g~d~i~~a~TGsGKT~ 52 (573)
T Consensus 69 tLe~fd~~~~~~l~~~~i~~La~~~fi~~~~Nvil~G~~GtGKTh 113 (254)
T PRK06526 69 SLEEFDFDHQRSLKRDTIAHLGTLDFVTGKENVVFLGPPGTGKTH 113 (254)
T ss_pred CHHHCCCCCCCCCCHHHHHHHHCCCHHHCCCCEEEECCCCCCHHH
T ss_conf 987678656789899999998637177658878998999986899