HHsearch alignment for GI: 254780601 and conserved domain: PRK07270

Probab=92.19  E-value=0.9  Score=24.39  Aligned_cols=117  Identities=17%  Similarity=0.134  Sum_probs=50.7

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH-HHHH
Q ss_conf             999928987468999999999861042122556882799984998999999999999854469879999889987-9999
Q gi|254780601|r   40 VLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSV-HRER  118 (573)
Q Consensus        40 ~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~~~~~v~~~~gg~~~-~~q~  118 (573)
T Consensus        40 yLF~GP~GtGKts~Ar-ifAkaLnC~~~~~---~~p-----------C~~-C~~C~~i~~g~~~DviEidaas~~gVd~I  103 (557)
T PRK07270         40 YLFSGPRGTGKTSAAK-IFAKAMNCPNQVD---GEP-----------CNN-CDICRDITNGSLEDVIEIDAASNNGVDEI  103 (557)
T ss_pred             EEEECCCCCCHHHHHH-HHHHHHCCCCCCC---CCC-----------CCC-CHHHHHHHCCCCCCEEEECCCCCCCHHHH
T ss_conf             4210899868999999-9999957999899---998-----------887-77999987589997487347776788999


Q ss_pred             HHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC---CCCCCEEEEECCCCCC
Q ss_conf             9612897599822310133210001224643189996131100100123578887521---4334225631111222
Q gi|254780601|r  119 RDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSS---PKKRRMLMFSATISPA  192 (573)
Q Consensus       119 ~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~~~i~~i~~~~---p~~~q~~l~SAT~~~~  192 (573)
T Consensus       104 Rei~~~~~---~~P------------~~~~yKV~IIDEah~Ls~~----A~NALLKtLEEPP~~~vFIL-~Ttep~k  160 (557)
T PRK07270        104 RDIRDKST---YAP------------SRATYKVYIIDEVHMLSTG----AFNALLKTLEEPTENVVFIL-ATTELHK  160 (557)
T ss_pred             HHHHHHHC---CCC------------CCCCEEEEEECCHHHCCHH----HHHHHHHHHHCCCCCEEEEE-EECCHHH
T ss_conf             99999842---387------------7788389997144534999----99989998528998769999-8499475