HHsearch alignment for GI: 254780601 and conserved domain: PRK07940
>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=96.18 E-value=0.075 Score=31.62 Aligned_cols=117 Identities=21% Similarity=0.291 Sum_probs=55.9
Q ss_pred CEEEECCCCCCHHH-HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH--HCCCEEEEEECCCCH-
Q ss_conf 69999289874689-99999999861042122556882799984998999999999999854--469879999889987-
Q gi|254780601|r 39 DVLVSAQTGSGKTV-AFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYA--KTGVVVAVCIGGVSV- 114 (573)
Q Consensus 39 d~i~~a~TGsGKT~-af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~--~~~~~v~~~~gg~~~- 114 (573)
T Consensus 41 AyLF~Gp~G~Gk~~~A~~~A~--~l~C~~~~~----~~-----cg~-------C~~C~~i~~g~hpDv~~i~p-~~~~i~ 101 (395)
T PRK07940 41 AWLFTGPPGSGRSNAARAFAA--ALQCTDPGV----PG-----CGE-------CRACRTVLAGTHPDVRVVVP-EGLSIG 101 (395)
T ss_pred EEEEECCCCCCHHHHHHHHHH--HHCCCCCCC----CC-----CCC-------CHHHHHHHCCCCCCEEEEEC-CCCCCC
T ss_conf 376368998788999999999--966999999----99-----987-------87899987689987189826-877688
Q ss_pred HHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC--CCCCCEEEEECCCCCC
Q ss_conf 99999612897599822310133210001224643189996131100100123578887521--4334225631111222
Q gi|254780601|r 115 HRERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSS--PKKRRMLMFSATISPA 192 (573)
Q Consensus 115 ~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~~~i~~i~~~~--p~~~q~~l~SAT~~~~ 192 (573)
T Consensus 102 id~iR~l~~--------------~~~~~p-~~~~~kv~ii~~a~~m~~~----a~NalLKtLEEPp~~~~fiL~t~~~~~ 162 (395)
T PRK07940 102 VDEVREIVQ--------------IAARRP-TTGRWRIVVIEDADRLTER----AANALLKAVEEPPPRTVWLLCAPSVED 162 (395)
T ss_pred HHHHHHHHH--------------HHHHCC-CCCCCEEEEEECHHHHCHH----HHHHHHHHHCCCCCCEEEEEEECCHHH
T ss_conf 999999999--------------985273-0379559998077874899----999999852178888699987399787
Q ss_pred C
Q ss_conf 0
Q gi|254780601|r 193 I 193 (573)
Q Consensus 193 i 193 (573)
T Consensus 163 l 163 (395)
T PRK07940 163 V 163 (395)
T ss_pred H
T ss_conf 4