HHsearch alignment for GI: 254780601 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=91.57  E-value=0.25  Score=28.09  Aligned_cols=39  Identities=21%  Similarity=0.320  Sum_probs=29.3

Q ss_pred             HHHHCCCCCCCHHHHHHHHHH------HCCCCEEEECCCCCCHHH
Q ss_conf             999787987898999999999------759969999289874689
Q gi|254780601|r   14 ALSERGYVNLTSVQEAILNPD------LREKDVLVSAQTGSGKTV   52 (573)
Q Consensus        14 ~l~~~g~~~pt~iQ~~~ip~~------l~g~d~i~~a~TGsGKT~   52 (573)
T Consensus        72 tle~fDf~~~~~l~~~~i~~La~~~fi~~~~Nvil~G~~GtGKTh  116 (258)
T PRK09183         72 TFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTH  116 (258)
T ss_pred             CHHHCCCCCCCCCCHHHHHHHHCCCHHHCCCCEEEECCCCCCHHH
T ss_conf             775556546886238999988258166558867998999986899