HHsearch alignment for GI: 254780601 and conserved domain: PRK09200

>PRK09200 preprotein translocase subunit SecA; Reviewed.
Probab=99.74  E-value=1.9e-14  Score=116.29  Aligned_cols=323  Identities=20%  Similarity=0.240  Sum_probs=200.5

Q ss_pred             HCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             78798789899999999975996999928987468999999999861042122556882799984998999999999999
Q gi|254780601|r   17 ERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEW   96 (573)
Q Consensus        17 ~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~   96 (573)
T Consensus        74 ~lg~-~~~dvQl~g~~~l~~g~--iaEm~TGEGKTL~a~l~~~l~al~g---------~~vhvvTvNdYLA~RDa~~m~~  141 (799)
T PRK09200         74 VLGM-RPYDVQLIGALVLHEGN--IAEMQTGEGKTLTATMPLYLNALEG---------KGVHLITTNDYLAKRDFEEMGQ  141 (799)
T ss_pred             HCCC-CCCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCC---------CCCEEEECCHHHHHHHHHHHHH
T ss_conf             6599-76568999899984695--2455178858999999999997469---------9818980055777887999999


Q ss_pred             HHHHCCCEEEEEECCCCHH---HHHHHHCCCCEEEEECCCCH-----HHHHH--CCCCCCCCCEEEEEECCCCCC-CC--
Q ss_conf             8544698799998899879---99996128975998223101-----33210--001224643189996131100-10--
Q gi|254780601|r   97 LYAKTGVVVAVCIGGVSVH---RERRDLQNGAHIVVGTPGRL-----CDHIR--GKGLNISHLKAVVLDEADEML-DL--  163 (573)
Q Consensus        97 l~~~~~~~v~~~~gg~~~~---~q~~~l~~~~~iiv~TPgrl-----~d~~~--~~~l~l~~v~~lVlDEaD~ml-~~--  163 (573)
T Consensus       142 iy~~lGl~vg~~~~~~~~~~~~~~~r~~~Y~~di~Y~tn~e~gfDyLrDn~~~~~~~~v~r~~~~aivDEvDsiLiDeAr  221 (799)
T PRK09200        142 VYEFLGLTVGLNFSDIDDYEYQAGEKKAIYEADIIYTTNSELGFDYLRDNLADSKEDKVLRPLNYAIIDEVDSILLDEAQ  221 (799)
T ss_pred             HHHHCCCEEEECCCCCCCCCCCHHHHHHHHHCCCEECCCCCCHHHHHCCCCCCCHHHCCCCCCCEEEEECHHHHHHHCCC
T ss_conf             99982965833368886443797999988747722235654003453012015676525778966898532667774135


Q ss_pred             -------------HHHHHHHHHHHHCCC---------CCCEEEEECCC-----------------CCCCH----HHHHH-
Q ss_conf             -------------012357888752143---------34225631111-----------------22200----11112-
Q gi|254780601|r  164 -------------GFRDDIEFILDSSPK---------KRRMLMFSATI-----------------SPAIT----TLAKN-  199 (573)
Q Consensus       164 -------------gf~~~i~~i~~~~p~---------~~q~~l~SAT~-----------------~~~i~----~l~~~-  199 (573)
T Consensus       222 tPliisg~~~~~~~~~~~~~~~~~~l~~~~dy~~d~~~~~v~lt~~G~~~~e~~~~~~~l~~~~~~~~~~~i~~al~A~~  301 (799)
T PRK09200        222 TPLVISGAPRVQSNLYHIAAEFVKTLEEDVDYEFDKEKKEVWLTDQGIEKAESYFGIDNLYSEEHQVLVRHIILALRAHY  301 (799)
T ss_pred             CCCEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             64121489876527999999998526774437851100677624457999999709975476557789999999999999


Q ss_pred             -HCCCCC------------------------------------CCCCCCCCCCCCCCCH-HCC-----------------
Q ss_conf             -101233------------------------------------3323332325665200-000-----------------
Q gi|254780601|r  200 -YQKDAV------------------------------------RVNIASENRQHSDIDY-RAV-----------------  224 (573)
Q Consensus       200 -~~~~p~------------------------------------~i~~~~~~~~~~~i~~-~~~-----------------  224 (573)
T Consensus       302 ~~~~d~~YiV~~~~v~ivDe~TGR~~~gr~~s~GlhQaiEaKE~v~i~~e~~t~a~it~Qn~Fr~y~kl~GmTGTa~~~~  381 (799)
T PRK09200        302 LFERDVDYIVYDGEIVLIDRFTGRVLPGRKLQDGLHQAIEAKEGVEVTEENRTMASITIQNLFRMFPKLSGMTGTAKTEE  381 (799)
T ss_pred             HHHCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHCCHHCCCCCCCHHHH
T ss_conf             98458627986681899878988748998266577999998708987888731266448989864723125767609899


Q ss_pred             -----------------------------CCCCCHHHHHHHHCC-CCC-CCCEEEEECCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf             -----------------------------000000245542001-023-5641677513023345655555422666301
Q gi|254780601|r  225 -----------------------------LVALSDRDNAIVNIL-RYH-GAKNAIVFCSTRASVSRFTKVLAEHLFQVVA  273 (573)
Q Consensus       225 -----------------------------~v~~~~k~~~l~~ll-~~~-~~~~~ivF~~t~~~~~~l~~~L~~~g~~~~~  273 (573)
T Consensus       382 ~Ef~~iY~l~v~~iPtn~p~~r~d~~d~v~~t~~~k~~av~~~v~~~~~~g~pvLvgt~sv~~Se~~s~~L~~~~i~h~v  461 (799)
T PRK09200        382 KEFFEVYNMEVVQIPTNRPIIRIDYPDKVFATVDEKYKAVIEEVKERHETGRPVLIGTGSIEQSEYFSKLLFEAGIPHNL  461 (799)
T ss_pred             HHHHHHHCCCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCHHH
T ss_conf             99999868776988999985445474301089999999999999999857998899838579999999999865764332


Q ss_pred             CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC--------CCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
Q ss_conf             04899999999998665448814998538650014578--------8733897058874789998603010378886025
Q gi|254780601|r  274 LSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLP--------DLELVIHAELSSNPENLLHRSGRTGRAGRKGMSV  345 (573)
Q Consensus       274 lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~--------~v~~Vin~d~P~~~~~yvHR~GRtgRag~~G~ai  345 (573)
T Consensus       462 LnAk--~~~~Ea~Iia~AG~~g~vTiaTnMAGRGtDI~l~~~v~~~GGL~Vigterhes~Rid~QlrGR~gRQGdpG~s~  539 (799)
T PRK09200        462 LNAK--NAAQEAQIIAEAGQKGAVTVATNMAGRGTDIKLGEGVHELGGLAVIGTERMESRRVDLQLRGRSGRQGDPGSSQ  539 (799)
T ss_pred             CCCC--CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEE
T ss_conf             0532--17789999982789994898454558986953384535438817740344514667767516534579998548


Q ss_pred             EEECHHHH
Q ss_conf             64059999
Q gi|254780601|r  346 FVIPQNMQ  353 (573)
Q Consensus       346 ~l~~~~e~  353 (573)
T Consensus       540 f~~sled~  547 (799)
T PRK09200        540 FFISLEDD  547 (799)
T ss_pred             EEEECCHH
T ss_conf             99851478