HHsearch alignment for GI: 254780601 and conserved domain: PRK09694
>PRK09694 hypothetical protein; Provisional.
Probab=99.81 E-value=2.3e-17 Score=136.00 Aligned_cols=307 Identities=18% Similarity=0.202 Sum_probs=180.2
Q ss_pred CCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 87898999999999759969999289874689999999998610421225568827999849989999999999998544
Q gi|254780601|r 21 VNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAK 100 (573)
Q Consensus 21 ~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~ 100 (573)
T Consensus 287 ~~PrplQ~~~~~l~~~PgL~IiEAptG~GKTEAAL~-~A~~L~~~~~------~~Gl~faLPT~ATaNaMf~Rv~~~~~~ 359 (878)
T PRK09694 287 YQPRQLQTLVDALPLAPGLTVIEAPTGSGKTETALA-YAWKLIDQQL------ADSVIFALPTQATANAMLSRMEAAASK 359 (878)
T ss_pred CCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHH-HHHHHHHHCC------CCCEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 999679999984567998799975899975899999-9999997348------983699774798899999999999997
Q ss_pred --CCCEEEEEECCCCHHHHHHHH-------------------------CCC--CEEEEECCCCHHH-HHHCCC-----CC
Q ss_conf --698799998899879999961-------------------------289--7599822310133-210001-----22
Q gi|254780601|r 101 --TGVVVAVCIGGVSVHRERRDL-------------------------QNG--AHIVVGTPGRLCD-HIRGKG-----LN 145 (573)
Q Consensus 101 --~~~~v~~~~gg~~~~~q~~~l-------------------------~~~--~~iiv~TPgrl~d-~~~~~~-----l~ 145 (573)
T Consensus 360 ~~~~~~v~LaHg~a~l~~~~~~l~~~~~~~~~~~~~~~~~~~W~~~~~Kr~LLap~~VGTiDQaLla~L~~kH~~LR~~g 439 (878)
T PRK09694 360 LFPSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKRVFLGQIGVCTIDQVLISVLPVKHRFIRGLG 439 (878)
T ss_pred HCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCEECCHHHHHHHHHCCCHHHHHHHH
T ss_conf 36899769744736550566651013676544543015777664111022313771546799999987461489999998
Q ss_pred CCCCEEEEEECCCCCCCCHH-HHHHHHHHHHCC-CCCCEEEEECCCCCCCH-HHHHHHCCCCCC---------CCCCCCC
Q ss_conf 46431899961311001001-235788875214-33422563111122200-111121012333---------3233323
Q gi|254780601|r 146 ISHLKAVVLDEADEMLDLGF-RDDIEFILDSSP-KKRRMLMFSATISPAIT-TLAKNYQKDAVR---------VNIASEN 213 (573)
Q Consensus 146 l~~v~~lVlDEaD~ml~~gf-~~~i~~i~~~~p-~~~q~~l~SAT~~~~i~-~l~~~~~~~p~~---------i~~~~~~ 213 (573)
T Consensus 440 La-~kvvIiDEVHAY-D~-Ym~~lL~~lL~wl~~~g~~viLLSATLP~~~R~~L~~ay~~~~~~~~~~~~YP~it~~~~~ 516 (878)
T PRK09694 440 IG-RSVLIVDEVHAY-DA-YMNGLLEAVLKAQAQVGGSVILLSATLPMTQKQKLLDTYGLHTDPVENNSAYPLINWRGVN 516 (878)
T ss_pred HC-CCEEEEECCCCC-CH-HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCC
T ss_conf 62-874897253334-58-8999999999999983998899927898999999999755688766667788613631556
Q ss_pred C--CCCCCCH-----HCCCC-----CC-CHHHHHHHHCCC-CCCCCEEEEECCCHHHHHHHHHHHHHCC---CCCCCCCC
Q ss_conf 2--5665200-----00000-----00-002455420010-2356416775130233456555554226---66301048
Q gi|254780601|r 214 R--QHSDIDY-----RAVLV-----AL-SDRDNAIVNILR-YHGAKNAIVFCSTRASVSRFTKVLAEHL---FQVVALSG 276 (573)
Q Consensus 214 ~--~~~~i~~-----~~~~v-----~~-~~k~~~l~~ll~-~~~~~~~ivF~~t~~~~~~l~~~L~~~g---~~~~~lhg 276 (573)
T Consensus 517 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~G~~v~vI~NTV~rAq~~y~~L~~~~~~~~~v~L~Hs 596 (878)
T PRK09694 517 GAQRFDLLAHQLPPRFSIQPEPICLADMLPDLTMLERMIAAANAGAQVCVICNLVDDAQVCYQRLKELNNTQVDIDLFHA 596 (878)
T ss_pred CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 66753446555677723788876314447648999999999978995999938899999999999985289987799868
Q ss_pred CCCHHHHHHH----HHHHHC-C---CEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCC
Q ss_conf 9999999999----866544-8---81499853865001457887338970588747899986030103788
Q gi|254780601|r 277 ELSQQERSNA----LQMMRD-G---RARVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGR 340 (573)
Q Consensus 277 ~~~q~~R~~~----~~~fr~-g---~~~vLV~TDvaaRGiDi~~v~~Vin~d~P~~~~~yvHR~GRtgRag~ 340 (573)
T Consensus 597 RF~~~DR~~~E~~vl~~~Gk~~~r~~g~IlVaTQVvEQSLDiD-fD~liTDLAP--iDlLlQR~GRLhRH~R 665 (878)
T PRK09694 597 RFTFNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDLD-FDWLITQHCP--ADLLFQRMGRLHRHHR 665 (878)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCC-CCHHHCCCCC--HHHHHHHHHHHHCCCC
T ss_conf 8877669999999999868898899986999773332430335-3301104686--9999987423205899