HHsearch alignment for GI: 254780601 and conserved domain: PRK09751
>PRK09751 putative ATP-dependent helicase Lhr; Provisional.
Probab=100.00 E-value=5.8e-37 Score=267.76 Aligned_cols=335 Identities=21% Similarity=0.236 Sum_probs=230.9
Q ss_pred EECCCCCCHHHHHHHHHHHHHHCCCCC----CCCCCCCEEEEECCCHHHHHHHHHHHHHHHH------------HCCCEE
Q ss_conf 992898746899999999986104212----2556882799984998999999999999854------------469879
Q gi|254780601|r 42 VSAQTGSGKTVAFGLALASTLLAENDR----FSPASAPLALAIAPTRELAVQVGRELEWLYA------------KTGVVV 105 (573)
Q Consensus 42 ~~a~TGsGKT~af~lp~l~~l~~~~~~----~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~------------~~~~~v 105 (573)
T Consensus 1 VvAPTGSGKTLAAFL~aLd~L~~~~~~~~~~~~~~~~~~VLYISPLKALa~Dv~rNL~~PL~gI~~~~~~~g~~~~~i~V 80 (1490)
T PRK09751 1 VIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 80 (1490)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 95988743989999999999996145555556788973899959278889999999987998889999862567899758
Q ss_pred EEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHC-CCCCCCCCEEEEEECCCCCCCCHHH----HHHHHHHHHCCCCC
Q ss_conf 999889987999996128975998223101332100-0122464318999613110010012----35788875214334
Q gi|254780601|r 106 AVCIGGVSVHRERRDLQNGAHIVVGTPGRLCDHIRG-KGLNISHLKAVVLDEADEMLDLGFR----DDIEFILDSSPKKR 180 (573)
Q Consensus 106 ~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl~d~~~~-~~l~l~~v~~lVlDEaD~ml~~gf~----~~i~~i~~~~p~~~ 180 (573)
T Consensus 81 ~vRtGDT~~~eR~r~~r~PPdILITTPESL~LlLtsk~r~~L~~v~~VIVDEiHalagsKRGahLaLsLeRL~~l~~~~~ 160 (1490)
T PRK09751 81 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSA 160 (1490)
T ss_pred EEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 63799999999999850899839848899999873569999779989996286442058839999999999998658999
Q ss_pred CEEEEECCCCCCCHHHHHHHCCC--CCCCCCCCCCCCCCCCCHHCCCCCC----------------------CHHH-HHH
Q ss_conf 22563111122200111121012--3333233323256652000000000----------------------0024-554
Q gi|254780601|r 181 RMLMFSATISPAITTLAKNYQKD--AVRVNIASENRQHSDIDYRAVLVAL----------------------SDRD-NAI 235 (573)
Q Consensus 181 q~~l~SAT~~~~i~~l~~~~~~~--p~~i~~~~~~~~~~~i~~~~~~v~~----------------------~~k~-~~l 235 (573)
T Consensus 161 qRIGLSATv~p-~e~v-A~fLgg~rpv~IV~~~~~k~-~~l~---v~vPv~d~~~~~~~~~~~g~~~~~~~~~siw~~v~ 234 (1490)
T PRK09751 161 QRIGLSATVRS-ASDV-AAFLGGDRPVTVVNPPAMRH-PQIR---IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIE 234 (1490)
T ss_pred CEEEEECCCCC-HHHH-HHHHCCCCCEEEECCCCCCC-CEEE---EEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 68999776689-9999-98737999837868888887-5279---97046653333323567763223555453167889
Q ss_pred HHCCC-CCCCCEEEEECCCHHHHHHHHHHHHHC------------------------------CC---CCCCCCCCCCHH
Q ss_conf 20010-235641677513023345655555422------------------------------66---630104899999
Q gi|254780601|r 236 VNILR-YHGAKNAIVFCSTRASVSRFTKVLAEH------------------------------LF---QVVALSGELSQQ 281 (573)
Q Consensus 236 ~~ll~-~~~~~~~ivF~~t~~~~~~l~~~L~~~------------------------------g~---~~~~lhg~~~q~ 281 (573)
T Consensus 235 ~~i~~~i~~hrsTLVF~NTR~~AErl~~~L~el~~erl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ia~aHHGSlSke 314 (1490)
T PRK09751 235 TGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 314 (1490)
T ss_pred HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99999997268769997887999999999999999873246432211000011122221123566543344555768999
Q ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCC-CCCCCCEEEEEECH-HHHHHHHHH
Q ss_conf 9999986654488149985386500145788733897058874789998603010-37888602564059-999999999
Q gi|254780601|r 282 ERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTG-RAGRKGMSVFVIPQ-NMQRRAERL 359 (573)
Q Consensus 282 ~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~~v~~Vin~d~P~~~~~yvHR~GRtg-Rag~~G~ai~l~~~-~e~~~~~~i 359 (573)
T Consensus 315 ~R~~vE~~LK~G~LraVVaTSSLELGIDiG~VDlVVQvgsP~sVAs~lQRvGRAGH~vg~~S~g~~~p~~r~dlle~av~ 394 (1490)
T PRK09751 315 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVI 394 (1490)
T ss_pred HHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHH
T ss_conf 99999999867997789977805407764465579980696678899997101257889844079962877899999999
Q ss_pred -HHHHHCCCCCCCCCC-HHHHHHHH
Q ss_conf -998506641056899-99988889
Q gi|254780601|r 360 -FREANVSVVWEPAPS-VEAIRERD 382 (573)
Q Consensus 360 -~~~~~~~~~~~~~Ps-~eeI~~~~ 382 (573)
T Consensus 395 ~~~~~~G~iE~~~~p~npLDVLAQq 419 (1490)
T PRK09751 395 VECMFAGRLENLTPPHNPLDVLAQQ 419 (1490)
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 9999829988778898559999999