HHsearch alignment for GI: 254780601 and conserved domain: PRK12899

>PRK12899 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.57  E-value=1.3e-11  Score=97.33  Aligned_cols=128  Identities=19%  Similarity=0.175  Sum_probs=96.8

Q ss_pred             CCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf             87898999999999759969999289874689999999998610421225568827999849989999999999998544
Q gi|254780601|r   21 VNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAK  100 (573)
Q Consensus        21 ~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~  100 (573)
T Consensus        93 mrhydVQliGgivLh~G~--IAEM~TGEGKTLvAtlpayLnAL~G---------kgVHVVTVNDYLA~RDaewMg~iy~f  161 (969)
T PRK12899         93 MVPYDVQILGAIAMHKGF--ITEMQTGEGKTLTAVMPLYLNALTG---------KPVHLVTVNDYLAQRDCEWVGSVLRW  161 (969)
T ss_pred             CCCCCHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCC---------CCCEEECCCHHHHHHHHHHHHHHHHH
T ss_conf             776517999899982684--1355178848999999999986459---------97099726436568669999999998


Q ss_pred             CCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCH-HHHHHCCCC-------CCCCCEEEEEECCCCCC
Q ss_conf             69879999889987999996128975998223101-332100012-------24643189996131100
Q gi|254780601|r  101 TGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRL-CDHIRGKGL-------NISHLKAVVLDEADEML  161 (573)
Q Consensus       101 ~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl-~d~~~~~~l-------~l~~v~~lVlDEaD~ml  161 (573)
T Consensus       162 LGLtVg~i~~~~~~~eRr~a--Y~~DItYgTn~E~GFDYLRDN~~a~~~~~~vqR~~~faIVDEvDSIL  228 (969)
T PRK12899        162 LGLTTGVLVSGSPLEKRKAI--YQCDVVYGTASEFGFDYLRDNSIATRKEEQVGRGFYFAIIDEVDSIL  228 (969)
T ss_pred             HCCEEEEECCCCCHHHHHHH--HCCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCEE
T ss_conf             09778563899898999998--66996787886667640137644268677517777446752331202