HHsearch alignment for GI: 254780601 and conserved domain: PRK12902
>PRK12902 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.64 E-value=8.8e-13 Score=105.15 Aligned_cols=280 Identities=21% Similarity=0.221 Sum_probs=167.5
Q ss_pred HCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 78798789899999999975996999928987468999999999861042122556882799984998999999999999
Q gi|254780601|r 17 ERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEW 96 (573)
Q Consensus 17 ~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~ 96 (573)
T Consensus 81 ~lg-~r~ydvQliGg~~Lh~G~--iaEM~TGEGKTL~atlp~ylnAL~G---------kgvHvvTvNdYLA~RDae~m~~ 148 (946)
T PRK12902 81 VLG-MRHFDVQLIGGMVLHEGQ--IAEMKTGEGKTLVATLPSYLNALTG---------KGVHVVTVNDYLARRDAEWMGQ 148 (946)
T ss_pred HCC-CCCCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCC---------CCEEEECCCHHHHHHHHHHHHH
T ss_conf 548-975579999899984684--1354178847999999999986559---------9709972652656867999999
Q ss_pred HHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCH-HHHHHC------CCCCCCCCEEEEEECCCCCC-CC-----
Q ss_conf 854469879999889987999996128975998223101-332100------01224643189996131100-10-----
Q gi|254780601|r 97 LYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRL-CDHIRG------KGLNISHLKAVVLDEADEML-DL----- 163 (573)
Q Consensus 97 l~~~~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl-~d~~~~------~~l~l~~v~~lVlDEaD~ml-~~----- 163 (573)
T Consensus 149 vy~fLGltvg~i~~~~~~~er~~a--Y~~DItY~Tn~E~gFDYLRDnm~~~~~~~vqr~~~~aIvDEvDSiLIDEArtPL 226 (946)
T PRK12902 149 VHRFLGLSVGLIQQDMSPEERKKN--YACDITYATNSELGFDYLRDNMATDISEVVQRPFNYCVIDEVDSILIDEARTPL 226 (946)
T ss_pred HHHHHCCEEEEECCCCCHHHHHHH--HCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECHHHHHHHCCCCCE
T ss_conf 999819778354899898999998--589827978887577235304478868843879965898542566543246764
Q ss_pred ---H-------HHHHHHHHHHHCC--------------------CCCCEEEEECCCC----------------CC---CH
Q ss_conf ---0-------1235788875214--------------------3342256311112----------------22---00
Q gi|254780601|r 164 ---G-------FRDDIEFILDSSP--------------------KKRRMLMFSATIS----------------PA---IT 194 (573)
Q Consensus 164 ---g-------f~~~i~~i~~~~p--------------------~~~q~~l~SAT~~----------------~~---i~ 194 (573)
T Consensus 227 IISg~~~~~~~~y~~~~~~~~~l~~~~~~~~~~~~~~~dy~idek~~~v~lTe~G~~~~e~~l~~~~ly~~~~~~~~~i~ 306 (946)
T PRK12902 227 IISGQVERPQEKYQKAAEVAAALQRAAELGKDGIDPEGDYEVDEKQRNVLLTDEGFAKAEQLLGVSDLFDPKDPWAHYIF 306 (946)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 64178876548899999999999986541013468888879875767331041469999987330223686455999999
Q ss_pred H-H-HHH-HCCCCC------------------------------------CCCCCCCCCCCCCCCH-HCC----------
Q ss_conf 1-1-112-101233------------------------------------3323332325665200-000----------
Q gi|254780601|r 195 T-L-AKN-YQKDAV------------------------------------RVNIASENRQHSDIDY-RAV---------- 224 (573)
Q Consensus 195 ~-l-~~~-~~~~p~------------------------------------~i~~~~~~~~~~~i~~-~~~---------- 224 (573)
T Consensus 307 ~aL~A~~lf~~d~dYiV~dg~v~IvDefTGR~m~gRr~s~GLHQAiEAKE~v~i~~e~~t~AsIT~Qn~Fr~Y~kLsGMT 386 (946)
T PRK12902 307 NALKAKELFIKDVNYIVRNGEAVIVDEFTGRVMPGRRWSDGLHQAIEAKEGVEIQPETQTLASITYQNFFLLYPKLAGMT 386 (946)
T ss_pred HHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCHHHCCCC
T ss_conf 99999998846981899899899986888877778814246899999872898788881002211878986461632685
Q ss_pred ------------------------------------CCCCCHHHHHHHHCC-CCC-CCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf ------------------------------------000000245542001-023-564167751302334565555542
Q gi|254780601|r 225 ------------------------------------LVALSDRDNAIVNIL-RYH-GAKNAIVFCSTRASVSRFTKVLAE 266 (573)
Q Consensus 225 ------------------------------------~v~~~~k~~~l~~ll-~~~-~~~~~ivF~~t~~~~~~l~~~L~~ 266 (573)
T Consensus 387 GTA~te~~Ef~~iY~l~Vv~IPTn~p~~R~D~~d~vy~t~~~K~~Av~~ei~~~~~~gqPVLVGT~SVe~SE~ls~lL~~ 466 (946)
T PRK12902 387 GTAKTEEVEFEKTYKLEVTVIPTNRPRRRQDWPDQVYKTEIAKWRAVANETAEMHKQGRPVLVGTTSVEKSELLSALLAE 466 (946)
T ss_pred CCCHHHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
T ss_conf 67587999999986886698589998424627002017999999999999999975899889972757989999999985
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
Q ss_conf 26663010489999999999866544881499853865001457
Q gi|254780601|r 267 HLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDL 310 (573)
Q Consensus 267 ~g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi 310 (573)
T Consensus 467 ~gi~h~VLNAk~~n~~~EAeIIA~AG~~gaVTIATNMAGRGTDI 510 (946)
T PRK12902 467 QGIPHNLLNAKPENVEREAEIVAQAGRKGAVTIATNMAGRGTDI 510 (946)
T ss_pred CCCCCCEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCE
T ss_conf 58862032578644278999999469999689745446898695