HHsearch alignment for GI: 254780601 and conserved domain: PRK12904

>PRK12904 preprotein translocase subunit SecA; Reviewed.
Probab=99.71  E-value=4.7e-14  Score=113.67  Aligned_cols=320  Identities=23%  Similarity=0.251  Sum_probs=196.1

Q ss_pred             HCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             78798789899999999975996999928987468999999999861042122556882799984998999999999999
Q gi|254780601|r   17 ERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEW   96 (573)
Q Consensus        17 ~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~   96 (573)
T Consensus        77 ~lg~-~~~dvQl~gg~~l~~g~--iaEM~TGEGKTL~atlp~ylnal~g---------~gvhvvTvNdYLA~RDa~~m~~  144 (833)
T PRK12904         77 VLGM-RHFDVQLIGGMVLHEGK--IAEMKTGEGKTLVATLPAYLNALTG---------KGVHVVTVNDYLAKRDAEWMGP  144 (833)
T ss_pred             HCCC-CCCHHHHHHHHHHHCCC--EEEEECCCCHHHHHHHHHHHHHHCC---------CCEEEEECCHHHHHHHHHHHHH
T ss_conf             6589-76478999899994695--2465068858999999999997369---------9819981555777877999999


Q ss_pred             HHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCH-HHHHHC------CCCCCCCCEEEEEECCCCCC-CC-----
Q ss_conf             854469879999889987999996128975998223101-332100------01224643189996131100-10-----
Q gi|254780601|r   97 LYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRL-CDHIRG------KGLNISHLKAVVLDEADEML-DL-----  163 (573)
Q Consensus        97 l~~~~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl-~d~~~~------~~l~l~~v~~lVlDEaD~ml-~~-----  163 (573)
T Consensus       145 ~~~~lGltvg~i~~~~~~~~r~~a--Y~~ditY~tn~e~gFDyLrDnm~~~~~~~v~r~~~~aivDE~DSiLiDeArtPL  222 (833)
T PRK12904        145 LYNFLGLSVGVILSGMSPEERREA--YAADITYGTNNEFGFDYLRDNMVFSLEDRVQRGLNYAIVDEVDSILIDEARTPL  222 (833)
T ss_pred             HHHHHCCEEEEECCCCCHHHHHHH--HHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCHHHEEECCCCCE
T ss_conf             999819788043899983999998--637713412543245412555437889875012572688641132013267773


Q ss_pred             ----------HHHHHHHHHHHHCC---------CCCCEEEEECCC--------------CCC------CHH-H-HHH-HC
Q ss_conf             ----------01235788875214---------334225631111--------------222------001-1-112-10
Q gi|254780601|r  164 ----------GFRDDIEFILDSSP---------KKRRMLMFSATI--------------SPA------ITT-L-AKN-YQ  201 (573)
Q Consensus       164 ----------gf~~~i~~i~~~~p---------~~~q~~l~SAT~--------------~~~------i~~-l-~~~-~~  201 (573)
T Consensus       223 iisg~~~~~~~~y~~~~~~~~~l~~~~dy~~d~~~~~v~lt~~G~~~~e~~~~~~~ly~~~~~~~~~~i~~al~A~~l~~  302 (833)
T PRK12904        223 IISGPAEDSSELYKRANKFVPTLKKEGDYTVDEKSRTVGLTEEGIEKAEKLLGIENLYDPENIALVHHVNQALRAHYLFK  302 (833)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             88678877779999999999974787867995155775314526999998506566578432369998899999999985


Q ss_pred             CCCCC------------------------------------CCCCCCCCCCCCCCH-HCC--------------------
Q ss_conf             12333------------------------------------323332325665200-000--------------------
Q gi|254780601|r  202 KDAVR------------------------------------VNIASENRQHSDIDY-RAV--------------------  224 (573)
Q Consensus       202 ~~p~~------------------------------------i~~~~~~~~~~~i~~-~~~--------------------  224 (573)
T Consensus       303 ~d~dYiV~d~~v~ivDe~TGR~m~grr~~~GlhQaiEaKE~v~i~~e~~t~a~iT~Qn~Fr~y~klsGMTGTa~te~~Ef  382 (833)
T PRK12904        303 RDVDYIVKDGEVVIVDEFTGRLMPGRRYSDGLHQAIEAKEGVKIQNENQTLASITFQNYFRMYEKLAGMTGTADTEAEEF  382 (833)
T ss_pred             CCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHCCHHCCCCCCCHHHHHHH
T ss_conf             68707988790799866777626787065477999999848877888700123029889832755135677867789999


Q ss_pred             --------------------------CCCCCHHHHHHHHCC-CCC-CCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             --------------------------000000245542001-023-5641677513023345655555422666301048
Q gi|254780601|r  225 --------------------------LVALSDRDNAIVNIL-RYH-GAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSG  276 (573)
Q Consensus       225 --------------------------~v~~~~k~~~l~~ll-~~~-~~~~~ivF~~t~~~~~~l~~~L~~~g~~~~~lhg  276 (573)
T Consensus       383 ~~iY~l~V~~IPtn~p~~R~d~~d~iy~t~~~K~~ai~~ei~~~~~~gqPvLvGT~sve~SE~ls~~L~~~~i~h~vLNA  462 (833)
T PRK12904        383 REIYNLDVVVIPTNRPMIRIDHPDLIYKTEKEKFDAVVEDIKERHKKGQPVLVGTTSIEKSELLSKLLKKAGIPHNVLNA  462 (833)
T ss_pred             HHHHCCCEEECCCCCCCEEEECCCCEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHCCC
T ss_conf             99868876985899985436088702079999999999999999976997899427479899999999873782776177


Q ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC--------------------------------CC-----CEEEEE
Q ss_conf             99999999998665448814998538650014578--------------------------------87-----338970
Q gi|254780601|r  277 ELSQQERSNALQMMRDGRARVCIATDVAARGIDLP--------------------------------DL-----ELVIHA  319 (573)
Q Consensus       277 ~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~--------------------------------~v-----~~Vin~  319 (573)
T Consensus       463 k--~~~~EA~Iia~AG~~gaVTiATNMAGRGTDI~LGGn~e~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~GGL~Vigt  540 (833)
T PRK12904        463 K--NHEREAEIIAQAGRPGAVTIATNMAGRGTDIKLGGNPEMLAAGLEDETEEQIAKIKAEWQKEHEEVLEAGGLHVIGT  540 (833)
T ss_pred             C--HHHHHHHHHHHCCCCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             3--66668899995599997687402567886821688633444432001466788888887653377886389279851


Q ss_pred             CCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHH
Q ss_conf             588747899986030103788860256405999
Q gi|254780601|r  320 ELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNM  352 (573)
Q Consensus       320 d~P~~~~~yvHR~GRtgRag~~G~ai~l~~~~e  352 (573)
T Consensus       541 erhesrRiD~QLrGR~GRQGDpG~s~f~lSleD  573 (833)
T PRK12904        541 ERHESRRIDNQLRGRSGRQGDPGSSRFYLSLED  573 (833)
T ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCH
T ss_conf             433346678786122145689985326541208