HHsearch alignment for GI: 254780601 and conserved domain: PRK13103

>PRK13103 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.68  E-value=1.8e-13  Score=109.78  Aligned_cols=320  Identities=21%  Similarity=0.230  Sum_probs=194.1

Q ss_pred             HCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             78798789899999999975996999928987468999999999861042122556882799984998999999999999
Q gi|254780601|r   17 ERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEW   96 (573)
Q Consensus        17 ~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~   96 (573)
T Consensus        78 ~lg~-r~~dvQl~gg~~lh~g~--iaEM~TGEGKTL~atlp~ylnal~g---------~gvhvvTvNdYLA~RDae~m~~  145 (913)
T PRK13103         78 VMGM-RHFDVQLIGGMTLHEGK--IAEMRTGEGKTLVGTLAVYLNALSG---------KGVHVVTVNDYLARRDANWMRP  145 (913)
T ss_pred             HCCC-CCCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCC---------CCEEEECCCHHHHHHHHHHHHH
T ss_conf             6489-76468999899984685--1465178855999999999987559---------9709972653655866999999


Q ss_pred             HHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCH-HHHHHC------CCCCCCCCEEEEEECCCCCC-CC-----
Q ss_conf             854469879999889987999996128975998223101-332100------01224643189996131100-10-----
Q gi|254780601|r   97 LYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRL-CDHIRG------KGLNISHLKAVVLDEADEML-DL-----  163 (573)
Q Consensus        97 l~~~~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl-~d~~~~------~~l~l~~v~~lVlDEaD~ml-~~-----  163 (573)
T Consensus       146 ~y~~lGltvg~i~~~~~~~~r~~--aY~~DitY~tn~e~gFDyLRDnm~~~~~~~vqr~~~~aivDEvDSiLIDEArtPL  223 (913)
T PRK13103        146 LYEFLGLSVGIVTPFQPPEEKRA--AYAADITYGTNNEFGFDYLRDNMAFSLDDKFQRELNFAVIDEVDSILIDEARTPL  223 (913)
T ss_pred             HHHHHCCEEEECCCCCCHHHHHH--HCCCCCEEECCCCCCCCCCCCCHHCCHHHHCCCCCCEEEEECHHHHHHHCCCCCE
T ss_conf             99981976855189999799997--4668864435764335345733104878843667764787423555531256853


Q ss_pred             ----------HHHHHHHHHHHHC--------------------CCCCCEEEEECC-------C--------------CC-
Q ss_conf             ----------0123578887521--------------------433422563111-------1--------------22-
Q gi|254780601|r  164 ----------GFRDDIEFILDSS--------------------PKKRRMLMFSAT-------I--------------SP-  191 (573)
Q Consensus       164 ----------gf~~~i~~i~~~~--------------------p~~~q~~l~SAT-------~--------------~~-  191 (573)
T Consensus       224 iIsg~~~~~~~~y~~~~~~~~~l~~~~~~~~~~~~~~~~y~~de~~~~v~lt~~G~~~~e~~l~~~~~~~~~~~l~~~~~  303 (913)
T PRK13103        224 IISGQAEDSSKLYIEINRLIPRLTQHIEEVEGQVTQEGHFTIDEKTRQVELNEAGHQFIEEMLTQAGLLAEGESLYSAHN  303 (913)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf             65068764257899999999999876654320236678668714656587554479999999876765555310034110


Q ss_pred             -----CCHH-H-HHH-HCCCCCC------------------------------------CCCCCCCCCCCCCCH-HCC--
Q ss_conf             -----2001-1-112-1012333------------------------------------323332325665200-000--
Q gi|254780601|r  192 -----AITT-L-AKN-YQKDAVR------------------------------------VNIASENRQHSDIDY-RAV--  224 (573)
Q Consensus       192 -----~i~~-l-~~~-~~~~p~~------------------------------------i~~~~~~~~~~~i~~-~~~--  224 (573)
T Consensus       304 ~~~~~~v~~aL~A~~l~~~d~~YiV~d~~v~ivDe~TGR~m~grr~s~GlhQaiEaKE~v~i~~e~~t~a~iT~Qn~Fr~  383 (913)
T PRK13103        304 LGLLTHVYAGLRAHKLFHRNVEYIVQDGQVLLIDEHTGRTMPGRRLSEGLHQAIEAKENLNIQAESQTLASTTFQNYFRL  383 (913)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHH
T ss_conf             24222477889999998669868998890899868888768898165368999998748977888730233019988734


Q ss_pred             --------------------------------------------CCCCCHHHHHHHHCC-CC-CCCCEEEEECCCHHHHH
Q ss_conf             --------------------------------------------000000245542001-02-35641677513023345
Q gi|254780601|r  225 --------------------------------------------LVALSDRDNAIVNIL-RY-HGAKNAIVFCSTRASVS  258 (573)
Q Consensus       225 --------------------------------------------~v~~~~k~~~l~~ll-~~-~~~~~~ivF~~t~~~~~  258 (573)
T Consensus       384 y~klsGMTGTa~te~~Ef~~iY~l~Vv~IPtn~p~~R~d~~d~iy~t~~~K~~Av~~ei~~~~~~gqPVLvGT~Sve~SE  463 (913)
T PRK13103        384 YNKLSGMTGTADTEAFEFRQIYGLDVMVIPPNKPLARKDFNDLVYLTAEEKYAAIITDIKECMALGRPVLVGTATIETSE  463 (913)
T ss_pred             CCHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
T ss_conf             50421675673868999999868866982799986101199869838999999999999999974998899627468899


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC---CC----------------------
Q ss_conf             65555542266630104899999999998665448814998538650014578---87----------------------
Q gi|254780601|r  259 RFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLP---DL----------------------  313 (573)
Q Consensus       259 ~l~~~L~~~g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~---~v----------------------  313 (573)
T Consensus       464 ~ls~~L~~~gi~h~VLNAk--~~~~EA~Iia~AG~~gaVTIATNMAGRGTDI~LGgn~e~~~~~~~~~~~e~~~~~~~~~  541 (913)
T PRK13103        464 HMSNLLKKEGIEHKVLNAK--YHEKEAEIIAQAGAPGALTIATNMAGRGTDILLGGNWEVEVAALENPTPEQIAQIKADW  541 (913)
T ss_pred             HHHHHHHHCCCCCEEECCC--CHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECCCCHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             9999999769975120488--73799999983378997897164568986952688603444310367677899999999


Q ss_pred             ------------CEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHH
Q ss_conf             ------------338970588747899986030103788860256405999
Q gi|254780601|r  314 ------------ELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNM  352 (573)
Q Consensus       314 ------------~~Vin~d~P~~~~~yvHR~GRtgRag~~G~ai~l~~~~e  352 (573)
T Consensus       542 ~~~~~~V~~~GGL~VIgterheSrRiDnQLrGRsGRQGDPG~s~F~lSleD  592 (913)
T PRK13103        542 QKRHQQVIEAGGLHVIASERHESRRIDNQLRGRAGRQGDPGSSRFYLSLED  592 (913)
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECH
T ss_conf             988778986298499961655212578786074356899986548997046