HHsearch alignment for GI: 254780601 and conserved domain: PRK13851

>PRK13851 type IV secretion system protein VirB11; Provisional.

Probab=94.58  E-value=0.064  Score=32.10  Aligned_cols=36  Identities=11%  Similarity=0.087  Sum_probs=16.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHH--CCCC--CCCCCCCCCHH
Q ss_conf             564167751302334565555542--2666--30104899999
Q gi|254780601|r  243 GAKNAIVFCSTRASVSRFTKVLAE--HLFQ--VVALSGELSQQ  281 (573)
Q Consensus       243 ~~~~~ivF~~t~~~~~~l~~~L~~--~g~~--~~~lhg~~~q~  281 (573)
T Consensus       236 rPDR--IivGEvRG-~EA~d~L~A~nTGH~GsitTiHAnSa~~  275 (343)
T PRK13851        236 RPDR--ILLGEMRD-DAAWAYLSEVVSGHPGSISTIHGANPVQ  275 (343)
T ss_pred             CCCE--EEEEEECC-HHHHHHHHHHHCCCCCCCEEECCCCHHH
T ss_conf             9982--89985266-9999999998469998303356799999