HHsearch alignment for GI: 254780601 and conserved domain: pfam06862
>pfam06862 DUF1253 Protein of unknown function (DUF1253). This family represents the C-terminal portion (approximately 500 residues) of several hypothetical eukaryotic proteins of unknown function.
Probab=99.69 E-value=2.1e-15 Score=122.74 Aligned_cols=290 Identities=19% Similarity=0.202 Sum_probs=193.7
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHHHHHH-CCC----EEEEEECCCCH----------HHHHHH--------------
Q ss_conf 5568827999849989999999999998544-698----79999889987----------999996--------------
Q gi|254780601|r 70 SPASAPLALAIAPTRELAVQVGRELEWLYAK-TGV----VVAVCIGGVSV----------HRERRD-------------- 120 (573)
Q Consensus 70 ~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~-~~~----~v~~~~gg~~~----------~~q~~~-------------- 120 (573)
T Consensus 31 QGftRPKVLIL~P~R~~A~~~V~~l~~l~~~~~~v~nk~RF~~ef~~~~~~~~~~~~~~kP~D~~~~F~GN~DD~FrlGi 110 (435)
T pfam06862 31 QGFTRPKVLILLPTRNIALEVVDTLIKLLPASDQVENKKRFNDEFGEDDDEEPPTLKTKKPEDFQALFKGNNDDMFRLGI 110 (435)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEE
T ss_conf 89888869998587899999999999875836667889999876188511157544679958899972899767388877
Q ss_pred ------HC-----CCCEEEEECCCCHHHHHHC------CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC---CCC-
Q ss_conf ------12-----8975998223101332100------01224643189996131100100123578887521---433-
Q gi|254780601|r 121 ------LQ-----NGAHIVVGTPGRLCDHIRG------KGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSS---PKK- 179 (573)
Q Consensus 121 ------l~-----~~~~iiv~TPgrl~d~~~~------~~l~l~~v~~lVlDEaD~ml~~gf~~~i~~i~~~~---p~~- 179 (573)
T Consensus 111 k~trksikLys~Fy~SDIIiASPLGLr~~i~~~~~k~rd~DFLSSIEvlIiDqad~l~MQN-W~Hv~~v~~~lN~~Pk~~ 189 (435)
T pfam06862 111 KFTRKSIKLYSPFYSSDIIIASPLGLRMIIENEDEKKRDYDFLSSIEVLIVDQADVILMQN-WEHVLTVFKHLNKIPKKS 189 (435)
T ss_pred EECCCEEEEECCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH-HHHHHHHHHHHCCCCCCC
T ss_conf 8706705984565658979988188899863677644456400004678743266898741-999999999844487756
Q ss_pred --------------------CCEEEEECCCCCCCHHHHHHHCCCCC-CCCCCCC------CCCCCCCCHHCCCCCCC---
Q ss_conf --------------------42256311112220011112101233-3323332------32566520000000000---
Q gi|254780601|r 180 --------------------RRMLMFSATISPAITTLAKNYQKDAV-RVNIASE------NRQHSDIDYRAVLVALS--- 229 (573)
Q Consensus 180 --------------------~q~~l~SAT~~~~i~~l~~~~~~~p~-~i~~~~~------~~~~~~i~~~~~~v~~~--- 229 (573)
T Consensus 190 h~~DfsRVR~w~L~g~ak~~RQTii~s~~~~p~~nsl~~~~~~N~~Gkvr~~~~~~~g~i~~v~~~v~Q~F~R~~~~s~~ 269 (435)
T pfam06862 190 HGADFSRVRMWYLDGQAKYYRQTIIFSSYITPEINSLFNSKCVNYRGKVKLKPIYKSGVIGQVGLKVRQIFQRFDASSIV 269 (435)
T ss_pred CCCCEEHEEHHHHCCCHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCEEEEEECCCCCC
T ss_conf 79982000075726723553466886336888899999974735565588734777755102567864269985689845
Q ss_pred ----HHHHH-----HHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf ----02455-----420010235641677513023345655555422666301048999999999986654488149985
Q gi|254780601|r 230 ----DRDNA-----IVNILRYHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIA 300 (573)
Q Consensus 230 ----~k~~~-----l~~ll~~~~~~~~ivF~~t~~~~~~l~~~L~~~g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~ 300 (573)
T Consensus 270 ~~~d~Rf~~F~~~vlp~l~~~~~~~~~LI~iPSYfDfVRvRn~l~~~~~sF~~i~EYt~~~~israR~~F~~g~~~iLLy 349 (435)
T pfam06862 270 DDPDARFKFFTSNVLPQLRKSSYDSGTLIFIPSYFDFVRIRNYLKKENVSFAAISEYTSQKKISRARTLFFSGRIKVLLY 349 (435)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 47468999999976057663578897899956458999999999870883776756388778999999987599418999
Q ss_pred CCCCC--CCCCCCCCCEEEEECCCCCHHHHHHHHCCCC------CCCCCCEEEEEECHHHHHHHHHHH
Q ss_conf 38650--0145788733897058874789998603010------378886025640599999999999
Q gi|254780601|r 301 TDVAA--RGIDLPDLELVIHAELSSNPENLLHRSGRTG------RAGRKGMSVFVIPQNMQRRAERLF 360 (573)
Q Consensus 301 TDvaa--RGiDi~~v~~Vin~d~P~~~~~yvHR~GRtg------Rag~~G~ai~l~~~~e~~~~~~i~ 360 (573)
T Consensus 350 TER~hffrRy~ikGi~~vIFY~~P~~p~FY~El~~~l~~s~~~~~~~~~~~v~~lyskyD~l~LErIV 417 (435)
T pfam06862 350 TERLHFFRRYKIKGVKNVIFYGPPENPQFYSELVRMLGKSVNNGEALAAASVRALYSKYDALALERIV 417 (435)
T ss_pred EHHHHHEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHHH
T ss_conf 60244411200278747999789998338999986551254454456776799998715487898875