HHsearch alignment for GI: 254780601 and conserved domain: pfam06862

>pfam06862 DUF1253 Protein of unknown function (DUF1253). This family represents the C-terminal portion (approximately 500 residues) of several hypothetical eukaryotic proteins of unknown function.
Probab=99.69  E-value=2.1e-15  Score=122.74  Aligned_cols=290  Identities=19%  Similarity=0.202  Sum_probs=193.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHHHHHH-CCC----EEEEEECCCCH----------HHHHHH--------------
Q ss_conf             5568827999849989999999999998544-698----79999889987----------999996--------------
Q gi|254780601|r   70 SPASAPLALAIAPTRELAVQVGRELEWLYAK-TGV----VVAVCIGGVSV----------HRERRD--------------  120 (573)
Q Consensus        70 ~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~-~~~----~v~~~~gg~~~----------~~q~~~--------------  120 (573)
T Consensus        31 QGftRPKVLIL~P~R~~A~~~V~~l~~l~~~~~~v~nk~RF~~ef~~~~~~~~~~~~~~kP~D~~~~F~GN~DD~FrlGi  110 (435)
T pfam06862        31 QGFTRPKVLILLPTRNIALEVVDTLIKLLPASDQVENKKRFNDEFGEDDDEEPPTLKTKKPEDFQALFKGNNDDMFRLGI  110 (435)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEE
T ss_conf             89888869998587899999999999875836667889999876188511157544679958899972899767388877


Q ss_pred             ------HC-----CCCEEEEECCCCHHHHHHC------CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC---CCC-
Q ss_conf             ------12-----8975998223101332100------01224643189996131100100123578887521---433-
Q gi|254780601|r  121 ------LQ-----NGAHIVVGTPGRLCDHIRG------KGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSS---PKK-  179 (573)
Q Consensus       121 ------l~-----~~~~iiv~TPgrl~d~~~~------~~l~l~~v~~lVlDEaD~ml~~gf~~~i~~i~~~~---p~~-  179 (573)
T Consensus       111 k~trksikLys~Fy~SDIIiASPLGLr~~i~~~~~k~rd~DFLSSIEvlIiDqad~l~MQN-W~Hv~~v~~~lN~~Pk~~  189 (435)
T pfam06862       111 KFTRKSIKLYSPFYSSDIIIASPLGLRMIIENEDEKKRDYDFLSSIEVLIVDQADVILMQN-WEHVLTVFKHLNKIPKKS  189 (435)
T ss_pred             EECCCEEEEECCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH-HHHHHHHHHHHCCCCCCC
T ss_conf             8706705984565658979988188899863677644456400004678743266898741-999999999844487756


Q ss_pred             --------------------CCEEEEECCCCCCCHHHHHHHCCCCC-CCCCCCC------CCCCCCCCHHCCCCCCC---
Q ss_conf             --------------------42256311112220011112101233-3323332------32566520000000000---
Q gi|254780601|r  180 --------------------RRMLMFSATISPAITTLAKNYQKDAV-RVNIASE------NRQHSDIDYRAVLVALS---  229 (573)
Q Consensus       180 --------------------~q~~l~SAT~~~~i~~l~~~~~~~p~-~i~~~~~------~~~~~~i~~~~~~v~~~---  229 (573)
T Consensus       190 h~~DfsRVR~w~L~g~ak~~RQTii~s~~~~p~~nsl~~~~~~N~~Gkvr~~~~~~~g~i~~v~~~v~Q~F~R~~~~s~~  269 (435)
T pfam06862       190 HGADFSRVRMWYLDGQAKYYRQTIIFSSYITPEINSLFNSKCVNYRGKVKLKPIYKSGVIGQVGLKVRQIFQRFDASSIV  269 (435)
T ss_pred             CCCCEEHEEHHHHCCCHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCEEEEEECCCCCC
T ss_conf             79982000075726723553466886336888899999974735565588734777755102567864269985689845


Q ss_pred             ----HHHHH-----HHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             ----02455-----420010235641677513023345655555422666301048999999999986654488149985
Q gi|254780601|r  230 ----DRDNA-----IVNILRYHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIA  300 (573)
Q Consensus       230 ----~k~~~-----l~~ll~~~~~~~~ivF~~t~~~~~~l~~~L~~~g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~  300 (573)
T Consensus       270 ~~~d~Rf~~F~~~vlp~l~~~~~~~~~LI~iPSYfDfVRvRn~l~~~~~sF~~i~EYt~~~~israR~~F~~g~~~iLLy  349 (435)
T pfam06862       270 DDPDARFKFFTSNVLPQLRKSSYDSGTLIFIPSYFDFVRIRNYLKKENVSFAAISEYTSQKKISRARTLFFSGRIKVLLY  349 (435)
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf             47468999999976057663578897899956458999999999870883776756388778999999987599418999


Q ss_pred             CCCCC--CCCCCCCCCEEEEECCCCCHHHHHHHHCCCC------CCCCCCEEEEEECHHHHHHHHHHH
Q ss_conf             38650--0145788733897058874789998603010------378886025640599999999999
Q gi|254780601|r  301 TDVAA--RGIDLPDLELVIHAELSSNPENLLHRSGRTG------RAGRKGMSVFVIPQNMQRRAERLF  360 (573)
Q Consensus       301 TDvaa--RGiDi~~v~~Vin~d~P~~~~~yvHR~GRtg------Rag~~G~ai~l~~~~e~~~~~~i~  360 (573)
T Consensus       350 TER~hffrRy~ikGi~~vIFY~~P~~p~FY~El~~~l~~s~~~~~~~~~~~v~~lyskyD~l~LErIV  417 (435)
T pfam06862       350 TERLHFFRRYKIKGVKNVIFYGPPENPQFYSELVRMLGKSVNNGEALAAASVRALYSKYDALALERIV  417 (435)
T ss_pred             EHHHHHEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHHH
T ss_conf             60244411200278747999789998338999986551254454456776799998715487898875