HHsearch alignment for GI: 254780601 and conserved domain: pfam07517
>pfam07517 SecA_DEAD SecA DEAD-like domain. SecA protein binds to the plasma membrane where it interacts with proOmpA to support translocation of proOmpA through the membrane. SecA protein achieves this translocation, in association with SecY protein, in an ATP dependent manner. This domain represents the N-terminal ATP-dependent helicase domain, which is related to the pfam00270.
Probab=98.85 E-value=7.9e-08 Score=71.82 Aligned_cols=136 Identities=24% Similarity=0.186 Sum_probs=101.8
Q ss_pred HHHHH-HCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHH
Q ss_conf 99999-78798789899999999975996999928987468999999999861042122556882799984998999999
Q gi|254780601|r 12 GEALS-ERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQV 90 (573)
Q Consensus 12 ~~~l~-~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv 90 (573)
T Consensus 67 rEa~~R~lg~-r~ydvQl~ggi~L~~G~--IaEM~TGEGKTL~atl~a~l~AL~G---------k~VhvvTvNdYLA~RD 134 (381)
T pfam07517 67 REAAKRVLGM-RHYDVQLIGGLVLHEGK--IAEMKTGEGKTLTATLPAYLNALSG---------KGVHVVTVNDYLAKRD 134 (381)
T ss_pred HHHHHHHHCC-CCCCHHHHHHHHHCCCC--EEEEECCCCCHHHHHHHHHHHHCCC---------CCCEEEECCHHHHHHH
T ss_conf 9999999488-24526999899970487--2588769981199999999997379---------9748997588886889
Q ss_pred HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCH-----HHHHH--CCCCCCCCCEEEEEECCCCCC
Q ss_conf 999999854469879999889987999996128975998223101-----33210--001224643189996131100
Q gi|254780601|r 91 GRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRL-----CDHIR--GKGLNISHLKAVVLDEADEML 161 (573)
Q Consensus 91 ~~~~~~l~~~~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl-----~d~~~--~~~l~l~~v~~lVlDEaD~ml 161 (573)
T Consensus 135 ae~m~~vy~~LGLsvg~i~~~~~~~err~a--Y~~DItYgTn~e~gFDYLRDnm~~~~~~~vqR~~~~aIVDEvDSiL 210 (381)
T pfam07517 135 AEWMGPLYEFLGLSVGVITSDMSPEERREA--YNCDITYGTNSELGFDYLRDNMALSKEDKVQRGLNFAIVDEVDSIL 210 (381)
T ss_pred HHHHHHHHHHHCCEEEECCCCCCHHHHHHH--HHCCCEECCHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCHHE
T ss_conf 999799999848605422788984888987--5166055032232144532344158254345777769997451121