BLAST/PSIBLAST alignment of GI: 254780601 and GI: 15890807 at iteration 1
>gi|15890807|ref|NP_356479.1| cold-shock dead-box protein A [Agrobacterium tumefaciens str. C58] Length = 615
>gi|15159093|gb|AAK89264.1| cold-shock dead-box protein A [Agrobacterium tumefaciens str. C58] Length = 615
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/568 (58%), Positives = 414/568 (72%), Gaps = 7/568 (1%)
Query: 1 MKIFENIPQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALAS 60
M + I I +AL +RGY +LT VQ+A+L P+L KD LVSAQTGSGKTVAFG+ALA+
Sbjct: 1 MTDTQGIAPAIAQALEKRGYKDLTPVQQAMLAPELANKDALVSAQTGSGKTVAFGIALAT 60
Query: 61 TLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRD 120
TLL+EN RF ASAPLALAIAPTRELA+QV RELEWLY GV +A C+GG+ + ERR
Sbjct: 61 TLLSENTRFGQASAPLALAIAPTRELAMQVKRELEWLYEFAGVSIASCVGGMDIRNERRA 120
Query: 121 LQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKR 180
L+ GAHIVVGTPGRLCDHI+ L++S ++AVVLDEADEMLDLGFR+D+EFIL+ SP R
Sbjct: 121 LERGAHIVVGTPGRLCDHIKRNALDLSSIRAVVLDEADEMLDLGFREDLEFILEESPDDR 180
Query: 181 RMLMFSATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILR 240
R LMFSAT+ +I LA++YQK+AVR+ ASE +QH DI+YRA+LV+ SDR+NAI+N LR
Sbjct: 181 RTLMFSATVPRSIAKLAESYQKNAVRIATASEQKQHVDIEYRALLVSPSDRENAIINALR 240
Query: 241 YHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIA 300
++ A+NAIVFCSTRA+V+ T L F VVALSGEL+Q ER++ALQ MRDGRARVC+A
Sbjct: 241 FYEARNAIVFCSTRAAVNHLTARLNNRGFSVVALSGELTQNERTHALQAMRDGRARVCVA 300
Query: 301 TDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNMQRRAERLF 360
TDVAARGIDLP LELVIHA+L +N E LLHRSGRTGRAG+KG+S V+P + +R+AERL
Sbjct: 301 TDVAARGIDLPGLELVIHADLPTNSETLLHRSGRTGRAGQKGVSAIVVPVSQRRKAERLL 360
Query: 361 REANVSVVWEPAPSVEAIRERDAQRILQDPLFLDSIQGDEKKMVDVLLAKHDPEKIAAGF 420
A VS W PSVE I ERD R+L DP +++ DE+ V+ LL +H EK+AA F
Sbjct: 361 EGAKVSAAWVRPPSVEEIVERDGARLLADPTLSEAVTDDERDFVNKLLEQHGAEKVAAAF 420
Query: 421 LRIHRAGLCAPEEITPVSLVSGRDRFRDDSRAFKVGGGSRD--NFKGSSWFSLSVGSKQK 478
+R++ +G APE+I V+L + R RD + RD +F S+WFSLSVG KQ
Sbjct: 421 VRLYHSGRSAPEDIFEVALDNTRKPRRDSFETTENNAPRRDRSDFSDSAWFSLSVGRKQS 480
Query: 479 AEARWLMPMLCRSSGINRQSIGAIRVQPDLTFVEVSADGVD----LLRRTVKLDKGIQLK 534
AE RWL+PMLCR I RQ IGAIR+Q TFVE++AD VD + + + L+KGI+LK
Sbjct: 481 AEPRWLIPMLCRFGKITRQDIGAIRMQQTETFVELAADAVDRFTSAIGKDMMLEKGIRLK 540
Query: 535 YLGGEKPDFRGYKSSGFKSKNSQDGATK 562
+ G KP+ G + +Q TK
Sbjct: 541 QMEG-KPEMTGNAREDTRPATAQRKFTK 567