RPSBLAST alignment for GI: 254780601 and conserved domain: TIGR00614

>gnl|CDD|129701 TIGR00614, recQ_fam, ATP-dependent DNA helicase, RecQ family. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Length = 470

 Score = 61.3 bits (149), Expect = 6e-10
 Identities = 76/352 (21%), Positives = 129/352 (36%), Gaps = 69/352 (19%)

Query: 19  GYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPA--SAPL 76
           G  +   VQ  ++N  L  +D  V   TG GK++ + L              PA  S  +
Sbjct: 8   GLSSFRPVQLEVINAVLLGRDCFVVMPTGGGKSLCYQL--------------PALCSDGI 53

Query: 77  ALAIAPTRELAV-QVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGA-----HIVVG 130
            L I+P   L   QV      L  K   + A  +       +++++          ++  
Sbjct: 54  TLVISPLISLMEDQV------LQLKASGIPATFLNSSQSKEQQKNVLTDLKDGKIKLLYV 107

Query: 131 TPGRLCDHIRGKGLNISHLKA------VVLDEADEMLDLG--FRDDIEF--ILDSSPKKR 180
           TP +         L +  L+       + +DEA  +   G  FR D +    L       
Sbjct: 108 TPEKCS---ASNRL-LQTLEERKGITLIAVDEAHCISQWGHDFRPDYKALGSLKQKFPNV 163

Query: 181 RMLMFSATISPAITTLAKNYQKDAVR--------VNIASENRQHSDIDYRAVLVALSDRD 232
            ++  +AT SP++       ++D +R        +   S +R +   + R          
Sbjct: 164 PIMALTATASPSV-------REDILRQLNLKNPQIFCTSFDRPNLYYEVR------RKTP 210

Query: 233 NAIVNILRY----HGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQ 288
             + ++LR+       K+ I++C +R    + T  L        A    L    R +   
Sbjct: 211 KILEDLLRFIRKEFKGKSGIIYCPSRKKSEQVTASLQNLGIAAGAYHAGLEISARDDVHH 270

Query: 289 -MMRDGRARVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAG 339
              RD   +V +AT     GI+ PD+  VIH  L  + E+    SGR GR G
Sbjct: 271 KFQRD-EIQVVVATVAFGMGINKPDVRFVIHYSLPKSMESYYQESGRAGRDG 321