RPSBLAST alignment for GI: 254780601 and conserved domain: TIGR01054

>gnl|CDD|162177 TIGR01054, rgy, reverse gyrase. Generally, these gyrases are encoded as a single polypeptide. An exception was found in Methanopyrus kandleri, where enzyme is split within the topoisomerase domain, yielding a heterodimer of gene products designated RgyB and RgyA. Length = 1171

 Score = 49.1 bits (117), Expect = 3e-06
 Identities = 68/329 (20%), Positives = 113/329 (34%), Gaps = 75/329 (22%)

Query: 35  LREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGREL 94
           LR     + A TG GKT  FGLA++  L  +  R           I PT  L +QV  ++
Sbjct: 91  LRGDSFAIIAPTGVGKT-TFGLAMSLFLAKKGKR--------CYIILPTTLLVIQVAEKI 141

Query: 95  EWLYAKTGV--VVAVCIGGVSVHRERRDL-----QNGAHIVVGTPGRLCDHIRGKGLNIS 147
             L  K GV  V           +E+++           I++ T   L  +         
Sbjct: 142 SSLAEKAGVGTVNIGAYHSRLPTKEKKEFMERIENGDFDILITTTMFLSKNYD---ELGP 198

Query: 148 HLKAVVLDEADEMLD-----------LGFRDDI-----------------------EFIL 173
               + +D+ D +L            LGF +++                         +L
Sbjct: 199 KFDFIFVDDVDALLKASKNVDKLLKLLGFSEELIEKAWKLIRLRLKLYRALHAKKRLELL 258

Query: 174 DSSPKKRR--MLMFSATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDR 231
           ++ P K+R  +++ SAT  P      +  +    R  +  E    SD     V V + D 
Sbjct: 259 EAIPGKKRGCLIVSSATGRP------RGKRAKLFRELLGFEVGGGSDTLRNVVDVYVEDE 312

Query: 232 D--NAIVNILRYHGAKNAIVFCSTRAS---VSRFTKVLAEHLFQVVALSGELSQQERSNA 286
           D    ++ I++  G    IV+ S            + L  H  + VA      +++    
Sbjct: 313 DLKETLLEIVKKLG-TGGIVYVSIDYGKEKAEEIAEFLENHGVKAVAYHATKPKED---- 367

Query: 287 LQMMRDGRARVCIAT----DVAARGIDLP 311
            +   +G   V I          RG+DLP
Sbjct: 368 YEKFAEGEIDVLIGVASYYGTLVRGLDLP 396