RPSBLAST alignment for GI: 254780601 and conserved domain: PRK01297

>gnl|CDD|179276 PRK01297, PRK01297, ATP-dependent RNA helicase RhlB; Provisional. Length = 475
 Score =  209 bits (533), Expect = 2e-54
 Identities = 117/338 (34%), Positives = 187/338 (55%), Gaps = 8/338 (2%)

Query: 14  ALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLL---AENDRFS 70
           A+ + G+   T +Q  +L   L   D +  AQTG+GKT AF +++ + LL      +R+ 
Sbjct: 101 AIHDLGFPYCTPIQAQVLGYTLAGHDAIGRAQTGTGKTAAFLISIINQLLQTPPPKERY- 159

Query: 71  PASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQ-NGAHIVV 129
               P AL IAPTREL VQ+ ++   L   TG+ V   +GG+   ++ + L+     I+V
Sbjct: 160 -MGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILV 218

Query: 130 GTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKK--RRMLMFSA 187
            TPGRL D  +   +++  ++ +VLDEAD MLD+GF   +  I+  +P+K  R+ L+FSA
Sbjct: 219 ATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPRKEERQTLLFSA 278

Query: 188 TISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILRYHGAKNA 247
           T +  +  LAK +  D   V I  EN     ++     VA SD+   + N++  +  +  
Sbjct: 279 TFTDDVMNLAKQWTTDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVTQNPWERV 338

Query: 248 IVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARG 307
           +VF + +  V R  + L +       LSG++ Q +R   L+  R+G+ RV +ATDVA RG
Sbjct: 339 MVFANRKDEVRRIEERLVKDGINAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRG 398

Query: 308 IDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSV 345
           I +  +  VI+  L  +P++ +HR GRTGRAG  G+S+
Sbjct: 399 IHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGVSI 436