RPSBLAST alignment for GI: 254780601 and conserved domain: PRK01297
>gnl|CDD|179276 PRK01297, PRK01297, ATP-dependent RNA helicase RhlB; Provisional. Length = 475
Score = 209 bits (533), Expect = 2e-54
Identities = 117/338 (34%), Positives = 187/338 (55%), Gaps = 8/338 (2%)
Query: 14 ALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLL---AENDRFS 70
A+ + G+ T +Q +L L D + AQTG+GKT AF +++ + LL +R+
Sbjct: 101 AIHDLGFPYCTPIQAQVLGYTLAGHDAIGRAQTGTGKTAAFLISIINQLLQTPPPKERY- 159
Query: 71 PASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQ-NGAHIVV 129
P AL IAPTREL VQ+ ++ L TG+ V +GG+ ++ + L+ I+V
Sbjct: 160 -MGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILV 218
Query: 130 GTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKK--RRMLMFSA 187
TPGRL D + +++ ++ +VLDEAD MLD+GF + I+ +P+K R+ L+FSA
Sbjct: 219 ATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPRKEERQTLLFSA 278
Query: 188 TISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILRYHGAKNA 247
T + + LAK + D V I EN ++ VA SD+ + N++ + +
Sbjct: 279 TFTDDVMNLAKQWTTDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVTQNPWERV 338
Query: 248 IVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARG 307
+VF + + V R + L + LSG++ Q +R L+ R+G+ RV +ATDVA RG
Sbjct: 339 MVFANRKDEVRRIEERLVKDGINAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRG 398
Query: 308 IDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSV 345
I + + VI+ L +P++ +HR GRTGRAG G+S+
Sbjct: 399 IHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGVSI 436