RPSBLAST alignment for GI: 254780601 and conserved domain: COG1200
>gnl|CDD|31393 COG1200, RecG, RecG-like helicase [DNA replication, recombination, and repair / Transcription]. Length = 677
Score = 46.4 bits (110), Expect = 2e-05
Identities = 73/348 (20%), Positives = 125/348 (35%), Gaps = 88/348 (25%)
Query: 41 LVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAK 100
L+ GSGKTV +AL + L A A AL +APT LA Q L
Sbjct: 287 LLQGDVGSGKTV---VALLAMLAA-----IEAGYQAAL-MAPTEILAEQHYESLRKWLEP 337
Query: 101 TGVVVAVCIGGVSVHRERRDLQNG-----AHIVVGTPGRLCDHIRGKGLNISHLKAVVLD 155
G+ VA+ G + + R+++ IVVGT + D + L + V++D
Sbjct: 338 LGIRVALLTGSLKG-KARKEILEQLASGEIDIVVGTHALIQDKVEFHNLGL-----VIID 391
Query: 156 E---------------ADEM--------------LDLGFRDDIEF-ILDSSPKKRRMLMF 185
E ++ L L D++ I+D P R+
Sbjct: 392 EQHRFGVHQRLALREKGEQNPHVLVMTATPIPRTLALTAFGDLDVSIIDELPPGRK---- 447
Query: 186 SATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILRYHGAK 245
P T + + ++ V I E + L+ S++ +
Sbjct: 448 -----PITTVVIPHERRPEVYERIREEIAKGRQAYVVCPLIEESEKLE----------LQ 492
Query: 246 NAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAA 305
A L E +V + G + E+ ++ ++G + +AT V
Sbjct: 493 AAEELY------EELKSFLPE--LKVGLVHGRMKPAEKDAVMEAFKEGEIDILVATTVIE 544
Query: 306 RGIDLPDLELVI--HAE---LSSNPENLLHR-SGRTGRAGRKGMSVFV 347
G+D+P+ +++ +AE L+ LH+ GR GR + V +
Sbjct: 545 VGVDVPNATVMVIENAERFGLAQ-----LHQLRGRVGRGDLQSYCVLL 587