RPSBLAST alignment for GI: 254780601 and conserved domain: COG4098

>gnl|CDD|33855 COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]. Length = 441

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 60/332 (18%), Positives = 126/332 (37%), Gaps = 46/332 (13%)

Query: 23  LTSVQEAILNPDLRE----KDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLAL 78
           L+  Q+   N  ++     +D LV A TG+GKT      +   L  +  R   AS     
Sbjct: 98  LSPGQKKASNQLVQYIKQKEDTLVWAVTGAGKTEMIFQGIEQAL-NQGGRVCIAS----- 151

Query: 79  AIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRLCDH 138
              P  ++ +++   L+  ++   + +        ++ +       A +VV T  +L   
Sbjct: 152 ---PRVDVCLELYPRLKQAFSNCDIDL--------LYGDSDSYFR-APLVVATTHQL--- 196

Query: 139 IRGKGLNISHLKAVVLDEADEMLDLGFRDD--IEFILDSSPKKRRMLMFSATISPAITTL 196
           +R K         +++DE D      F DD  +++ +  + KK    ++  T +P     
Sbjct: 197 LRFK----QAFDLLIIDEVDA---FPFSDDQSLQYAVKKARKKEGATIY-LTATPTKKLE 248

Query: 197 AKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDR-------DNAIVNILRYH--GAKNA 247
            K  + +   + + +          + V +   ++          +   L       +  
Sbjct: 249 RKILKGNLRILKLPARFHGKPLPVPKFVWIGNWNKKLQRNKLPLKLKRWLEKQRKTGRPV 308

Query: 248 IVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARG 307
           ++F     ++ +    L + L +    S     Q R   ++  RDG+  + I T +  RG
Sbjct: 309 LIFFPEIETMEQVAAALKKKLPKETIASVHSEDQHRKEKVEAFRDGKITLLITTTILERG 368

Query: 308 IDLPDLEL-VIHAELSS-NPENLLHRSGRTGR 337
           +  P++++ V+ AE        L+  +GR GR
Sbjct: 369 VTFPNVDVFVLGAEHRVFTESALVQIAGRVGR 400