RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0329
>gnl|CDD|35550 KOG0329, KOG0329, KOG0329, ATP-dependent RNA helicase [RNA processing and modification]. Length = 387
Score = 132 bits (334), Expect = 2e-31
Identities = 92/335 (27%), Positives = 158/335 (47%), Gaps = 44/335 (13%)
Query: 14 ALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPAS 73
A+ + G+ + + VQ + + DVL A++G GKT F LA + + + S
Sbjct: 56 AIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVDGQVS--- 112
Query: 74 APLALAIAPTRELAVQVGRELEWLYAK--TGVVVAVCIGGVSVHRERRDLQNGAHIVVGT 131
L + TRELA Q+ +E E ++K V V+V GG+ + ++ L+N HIVVGT
Sbjct: 113 ---VLVMCHTRELAFQISKEYE-RFSKYMPSVKVSVFFGGLFIKKDEELLKNCPHIVVGT 168
Query: 132 PGRLCDHIRGKGLNISHLKAVVLDEADEML-DLGFRDDIEFILDSSPKKRRMLMFSATIS 190
PGR+ +R + LN+ ++K VLDE D+ML L R D++ I +P +++++MFSAT+S
Sbjct: 169 PGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLS 228
Query: 191 PAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILRYHGAKNAIVF 250
I + + +D + + + E + L HG + V
Sbjct: 229 KEIRPVCHKFMQDPMEIFVDDEAK------------------------LTLHGLQQYYVK 264
Query: 251 CSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDL 310
+ +L F V + + Q R + +ATD+ RG+D+
Sbjct: 265 LKENEKNRKLNDLLDVLEFNQVVIFVKSVQ----------RLSFQKRLVATDLFGRGMDI 314
Query: 311 PDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSV 345
+ +V + ++ + + LHR R GR G KG+++
Sbjct: 315 ERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAI 349