RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0336

>gnl|CDD|35557 KOG0336, KOG0336, KOG0336, ATP-dependent RNA helicase [RNA processing and modification]. Length = 629
 Score =  185 bits (470), Expect = 3e-47
 Identities = 117/370 (31%), Positives = 188/370 (50%), Gaps = 9/370 (2%)

Query: 4   FENIPQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLL 63
           F+  P+V+   + + G+   T +Q       L+  D++  AQTG+GKT+AF L     + 
Sbjct: 225 FQCYPEVMEN-IKKTGFQKPTPIQSQAWPILLQGIDLIGVAQTGTGKTLAFLLPGFIHID 283

Query: 64  AENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCI-GGVSVHRERRDLQ 122
           A+  R    + P  L + PTRELA+Q+  E++  Y+  G+  +VC+ GG + + +  DL+
Sbjct: 284 AQPKRREQRNGPGVLVLTPTRELALQIEGEVK-KYSYNGLK-SVCVYGGGNRNEQIEDLK 341

Query: 123 NGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRM 182
            G  I++ TPGRL D      +N++ +  +VLDEAD MLD+GF   I  IL      R+ 
Sbjct: 342 RGVEIIIATPGRLNDLQMDNVINLASITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQT 401

Query: 183 LMFSATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILRYH 242
           +M SAT    +  LA++Y K+ + V + S +        + ++V        IV     +
Sbjct: 402 VMTSATWPEGVRRLAQSYLKEPMIVYVGSLDLVAVKSVKQNIIVTTDSEKLEIVQFFVAN 461

Query: 243 GAKN--AIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIA 300
            + N   I+F S +      +           +L G   Q +R  AL+  + G  R+ +A
Sbjct: 462 MSSNDKVIIFVSRKVMADHLSSDFCLKGISSQSLHGNREQSDREMALEDFKSGEVRILVA 521

Query: 301 TDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNMQRRAERLF 360
           TD+A+RG+D+PD+  V + +   N E  +HR GRTGRAGR G S+  + +N    AE L 
Sbjct: 522 TDLASRGLDVPDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGTSISFLTRNDWSMAEELI 581

Query: 361 R---EANVSV 367
           +    A   V
Sbjct: 582 QILERAEQEV 591