RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0336
>gnl|CDD|35557 KOG0336, KOG0336, KOG0336, ATP-dependent RNA helicase [RNA processing and modification]. Length = 629
Score = 185 bits (470), Expect = 3e-47
Identities = 117/370 (31%), Positives = 188/370 (50%), Gaps = 9/370 (2%)
Query: 4 FENIPQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLL 63
F+ P+V+ + + G+ T +Q L+ D++ AQTG+GKT+AF L +
Sbjct: 225 FQCYPEVMEN-IKKTGFQKPTPIQSQAWPILLQGIDLIGVAQTGTGKTLAFLLPGFIHID 283
Query: 64 AENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCI-GGVSVHRERRDLQ 122
A+ R + P L + PTRELA+Q+ E++ Y+ G+ +VC+ GG + + + DL+
Sbjct: 284 AQPKRREQRNGPGVLVLTPTRELALQIEGEVK-KYSYNGLK-SVCVYGGGNRNEQIEDLK 341
Query: 123 NGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRM 182
G I++ TPGRL D +N++ + +VLDEAD MLD+GF I IL R+
Sbjct: 342 RGVEIIIATPGRLNDLQMDNVINLASITYLVLDEADRMLDMGFEPQIRKILLDIRPDRQT 401
Query: 183 LMFSATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILRYH 242
+M SAT + LA++Y K+ + V + S + + ++V IV +
Sbjct: 402 VMTSATWPEGVRRLAQSYLKEPMIVYVGSLDLVAVKSVKQNIIVTTDSEKLEIVQFFVAN 461
Query: 243 GAKN--AIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIA 300
+ N I+F S + + +L G Q +R AL+ + G R+ +A
Sbjct: 462 MSSNDKVIIFVSRKVMADHLSSDFCLKGISSQSLHGNREQSDREMALEDFKSGEVRILVA 521
Query: 301 TDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNMQRRAERLF 360
TD+A+RG+D+PD+ V + + N E +HR GRTGRAGR G S+ + +N AE L
Sbjct: 522 TDLASRGLDVPDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGTSISFLTRNDWSMAEELI 581
Query: 361 R---EANVSV 367
+ A V
Sbjct: 582 QILERAEQEV 591