RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0337

>gnl|CDD|35558 KOG0337, KOG0337, KOG0337, ATP-dependent RNA helicase [RNA processing and modification]. Length = 529
 Score =  141 bits (357), Expect = 5e-34
 Identities = 99/330 (30%), Positives = 170/330 (51%), Gaps = 6/330 (1%)

Query: 14  ALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPAS 73
           A+ ++G+   T +Q   +   L  +DV+  A+TGSGKT AF + +   L + +      +
Sbjct: 35  AIHKKGFNTPTPIQRKTIPLILEGRDVVGMARTGSGKTAAFLIPMIEKLKSHSQ-----T 89

Query: 74  APLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPG 133
              AL ++PTRELA+Q  + ++ L   T +  ++ +GG S+  +   L     I++ TPG
Sbjct: 90  GLRALILSPTRELALQTLKVVKDLGRGTKLRQSLLVGGDSIEEQFILLNENPDIIIATPG 149

Query: 134 RLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRMLMFSATISPAI 193
           RL        L +S ++ VV DEAD + ++GF++ +  IL   P+ R+ L+FSAT+   +
Sbjct: 150 RLLHLGVEMTLTLSSVEYVVFDEADRLFEMGFQEQLHEILSRLPESRQTLLFSATLPRDL 209

Query: 194 TTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILRYH-GAKNAIVFCS 252
              AK      V V +  E +    +  R   V  ++++ A+++IL      K  IVF +
Sbjct: 210 VDFAKAGLVPPVLVRLDVETKISELLKVRFFRVRKAEKEAALLSILGGRIKDKQTIVFVA 269

Query: 253 TRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPD 312
           T+  V     +L +   +   +   L Q+ R    +  R  +  + + TDVAARG+D+P 
Sbjct: 270 TKHHVEYVRGLLRDFGGEGSDIYSSLDQEARKINGRDFRGRKTSILVVTDVAARGLDIPL 329

Query: 313 LELVIHAELSSNPENLLHRSGRTGRAGRKG 342
           L+ VI+ +   + +  +HR GR  RAGR G
Sbjct: 330 LDNVINYDFPPDDKLFVHRVGRVARAGRTG 359