RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0337
>gnl|CDD|35558 KOG0337, KOG0337, KOG0337, ATP-dependent RNA helicase [RNA processing and modification]. Length = 529
Score = 141 bits (357), Expect = 5e-34
Identities = 99/330 (30%), Positives = 170/330 (51%), Gaps = 6/330 (1%)
Query: 14 ALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPAS 73
A+ ++G+ T +Q + L +DV+ A+TGSGKT AF + + L + + +
Sbjct: 35 AIHKKGFNTPTPIQRKTIPLILEGRDVVGMARTGSGKTAAFLIPMIEKLKSHSQ-----T 89
Query: 74 APLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPG 133
AL ++PTRELA+Q + ++ L T + ++ +GG S+ + L I++ TPG
Sbjct: 90 GLRALILSPTRELALQTLKVVKDLGRGTKLRQSLLVGGDSIEEQFILLNENPDIIIATPG 149
Query: 134 RLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRMLMFSATISPAI 193
RL L +S ++ VV DEAD + ++GF++ + IL P+ R+ L+FSAT+ +
Sbjct: 150 RLLHLGVEMTLTLSSVEYVVFDEADRLFEMGFQEQLHEILSRLPESRQTLLFSATLPRDL 209
Query: 194 TTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILRYH-GAKNAIVFCS 252
AK V V + E + + R V ++++ A+++IL K IVF +
Sbjct: 210 VDFAKAGLVPPVLVRLDVETKISELLKVRFFRVRKAEKEAALLSILGGRIKDKQTIVFVA 269
Query: 253 TRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPD 312
T+ V +L + + + L Q+ R + R + + + TDVAARG+D+P
Sbjct: 270 TKHHVEYVRGLLRDFGGEGSDIYSSLDQEARKINGRDFRGRKTSILVVTDVAARGLDIPL 329
Query: 313 LELVIHAELSSNPENLLHRSGRTGRAGRKG 342
L+ VI+ + + + +HR GR RAGR G
Sbjct: 330 LDNVINYDFPPDDKLFVHRVGRVARAGRTG 359