RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0338
>gnl|CDD|35559 KOG0338, KOG0338, KOG0338, ATP-dependent RNA helicase [RNA processing and modification]. Length = 691
Score = 200 bits (510), Expect = 9e-52
Identities = 113/346 (32%), Positives = 176/346 (50%), Gaps = 11/346 (3%)
Query: 6 NIPQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAE 65
N+ + + +A S GY T +Q A + L KD+ A TGSGKT AF L + LL
Sbjct: 187 NLSRPLLKACSTLGYKKPTPIQVATIPVALLGKDICACAATGSGKTAAFALPILERLL-- 244
Query: 66 NDRFSPASAPLA--LAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQN 123
+ P L + PTRELA+QV + L T + V + +GG+ + + L++
Sbjct: 245 ---YRPKKVAATRVLVLVPTRELAIQVHSVTKQLAQFTDITVGLAVGGLDLKAQEAVLRS 301
Query: 124 GAHIVVGTPGRLCDHIRG-KGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRM 182
IV+ TPGRL DH+R N+ ++ +VLDEAD ML+ GF D++ I+ PK R+
Sbjct: 302 RPDIVIATPGRLIDHLRNSPSFNLDSIEVLVLDEADRMLEEGFADEMNEIIRLCPKNRQT 361
Query: 183 LMFSATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALS---DRDNAIVNIL 239
++FSAT++ + LA VR+ + + + + DR+ + +++
Sbjct: 362 MLFSATMTEEVKDLASLSLNKPVRIFVDPNKDTAPKLTQEFIRIRPKREGDREAMLASLI 421
Query: 240 RYHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCI 299
IVF T+ R +L + L G L+Q++R +L+ + V I
Sbjct: 422 TRTFQDRTIVFVRTKKQAHRLRILLGLLGLKAGELHGSLTQEQRLESLEKFKKEEIDVLI 481
Query: 300 ATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSV 345
ATDVA+RG+D+ ++ VI+ + E+ LHR GRT RAGR G SV
Sbjct: 482 ATDVASRGLDIEGVQTVINYAMPKTIEHYLHRVGRTARAGRAGRSV 527