RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0339

>gnl|CDD|35560 KOG0339, KOG0339, KOG0339, ATP-dependent RNA helicase [RNA processing and modification]. Length = 731
 Score =  187 bits (477), Expect = 5e-48
 Identities = 113/352 (32%), Positives = 176/352 (50%), Gaps = 5/352 (1%)

Query: 13  EALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPA 72
            A+ +  Y   T +Q   L   L  +DV+  A+TGSGKT AF   +   ++ + +   P 
Sbjct: 236 TAIRKSEYEKPTPIQCQALPTALSGRDVIGIAKTGSGKTAAFIWPMIVHIMDQPE-LKPG 294

Query: 73  SAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTP 132
             P+ + + PTRELA Q+  E +      G+ V    GG S   + ++L+ GA IVV TP
Sbjct: 295 EGPIGVILVPTRELASQIFSEAKKFGKAYGLRVVAVYGGGSKWEQSKELKEGAEIVVATP 354

Query: 133 GRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRMLMFSATISPA 192
           GRL D ++ K  N+S +  +VLDEAD M D+GF   +  I       R+ L+FSAT    
Sbjct: 355 GRLIDMVKMKATNLSRVSYLVLDEADRMFDMGFEPQVRSIKQHIRPDRQTLLFSATFKKK 414

Query: 193 ITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDN---AIVNILRYHGAKNAIV 249
           I  LA++   D VRV        + DI  + V V  S+       + +++ +      ++
Sbjct: 415 IEKLARDILSDPVRVVQGEVGEANEDIT-QTVSVCPSEEKKLNWLLRHLVEFSSEGKVLI 473

Query: 250 FCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGID 309
           F + +A        L    F V  L G+  Q ER+  L   +  R  V +ATDVAARG+D
Sbjct: 474 FVTKKADAEEIAANLKLKGFNVSLLHGDKDQAERNEVLSKFKKKRKPVLVATDVAARGLD 533

Query: 310 LPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNMQRRAERLFR 361
           +P ++ V++ + + + +   HR GRTGRAG KG++  ++ +     A  L  
Sbjct: 534 IPSIKTVVNYDFARDIDTHTHRIGRTGRAGEKGVAYTLVTEKDAEFAGHLVN 585