RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0340

>gnl|CDD|35561 KOG0340, KOG0340, KOG0340, ATP-dependent RNA helicase [RNA processing and modification]. Length = 442
 Score =  208 bits (530), Expect = 4e-54
 Identities = 120/351 (34%), Positives = 185/351 (52%), Gaps = 23/351 (6%)

Query: 13  EALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPA 72
           E L   G    T +Q+A +   L  +D +  A+TGSGKT AF L + + L    D +   
Sbjct: 20  EQLKALGIKKPTPIQQACIPKILEGRDCIGCAKTGSGKTAAFALPILNRL--SEDPYGI- 76

Query: 73  SAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTP 132
               AL + PTRELA+Q+  +   L     + V+V +GG  +  +   L +  H+VV TP
Sbjct: 77  ---FALVLTPTRELALQIAEQFIALGKLLNLKVSVIVGGTDMIMQAAILSDRPHVVVATP 133

Query: 133 GRLCDHIRGKGLNIS----HLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRMLMFSAT 188
           GRL DH+       S     LK +VLDEAD +L   F D +E I +  PK R+ L+FSAT
Sbjct: 134 GRLADHLSSNLGVCSWIFQRLKFLVLDEADRVLAGCFPDILEGIEECLPKPRQTLLFSAT 193

Query: 189 ISPAITTLAKNYQKDAVRVNIASENRQHSDI------DYRAVLVALSDRDNAIVNILR-- 240
           I+  I  L        +  +IA E      +          +LV++  +D  +V++LR  
Sbjct: 194 ITDTIKQL----FGCPITKSIAFELEVIDGVSTVETLYQGYILVSIDVKDAYLVHLLRDF 249

Query: 241 -YHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCI 299
                 + ++F +T       +  L     +VV+L  ++ Q+ER  AL   R   AR+ I
Sbjct: 250 ENKENGSIMIFVNTTRECQLLSMTLKNLEVRVVSLHSQMPQKERLAALSRFRSNAARILI 309

Query: 300 ATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQ 350
           ATDVA+RG+D+P +ELV++ ++  +P++ +HR GRT RAGRKGM++ ++ Q
Sbjct: 310 ATDVASRGLDIPTVELVVNHDIPRDPKDYIHRVGRTARAGRKGMAISIVTQ 360