RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0344

>gnl|CDD|35565 KOG0344, KOG0344, KOG0344, ATP-dependent RNA helicase [RNA processing and modification]. Length = 593
 Score =  120 bits (303), Expect = 8e-28
 Identities = 97/350 (27%), Positives = 165/350 (47%), Gaps = 17/350 (4%)

Query: 8   PQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAEND 67
            +++   L E G+   T +Q+  +   L ++DVL  A TGSGKT+AF L +   L   + 
Sbjct: 145 KRLLEN-LQELGFDEPTPIQKQAIPVFLEKRDVLACAPTGSGKTLAFNLPILQHLKDLSQ 203

Query: 68  RFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVV-AVCIGGVSVHRERRDLQNGAH 126
                    AL ++PTRELA Q+ RE+       G  + A      +   ++    +   
Sbjct: 204 EKHK-VGLRALILSPTRELAAQIYREMRKYSIDEGTSLRAAQFSKPAYPSQKPAFLSDEK 262

Query: 127 --IVVGTPGRLCDHIRGKGLNI--SHLKAVVLDEADEMLD-LGFRDDIEFILD--SSPKK 179
             I++ TP R+   +    LNI  S ++ +V+DEAD + +   F + +  I     SP  
Sbjct: 263 YDILISTPMRIVGLLGLGKLNIDLSKVEWLVVDEADLLFEPEFFVEQLADIYSACQSPDI 322

Query: 180 RRMLMFSATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSD-RDNAIVNI 238
           R   +FSATIS  +   A+  + D  RV +   N  +  +D   V       +  A+  +
Sbjct: 323 RVA-LFSATISVYVEEWAELIKSDLKRVIVGLRNSANETVDQELVFCGSEKGKLLALRQL 381

Query: 239 LRYHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALS---GELSQQERSNALQMMRDGRA 295
           +        ++F  ++    +  + L   ++  + +    GE SQ++R   ++  R G+ 
Sbjct: 382 VASGFKPPVLIFVQSKERAKQLFEELE--IYDNINVDVIHGERSQKQRDETMERFRIGKI 439

Query: 296 RVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSV 345
            V I TD+ ARGID   + LVI+ +   +  + +HR GRTGRAGR G ++
Sbjct: 440 WVLICTDLLARGIDFKGVNLVINYDFPQSDLSYIHRIGRTGRAGRSGKAI 489