RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0344
>gnl|CDD|35565 KOG0344, KOG0344, KOG0344, ATP-dependent RNA helicase [RNA processing and modification]. Length = 593
Score = 120 bits (303), Expect = 8e-28
Identities = 97/350 (27%), Positives = 165/350 (47%), Gaps = 17/350 (4%)
Query: 8 PQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAEND 67
+++ L E G+ T +Q+ + L ++DVL A TGSGKT+AF L + L +
Sbjct: 145 KRLLEN-LQELGFDEPTPIQKQAIPVFLEKRDVLACAPTGSGKTLAFNLPILQHLKDLSQ 203
Query: 68 RFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVV-AVCIGGVSVHRERRDLQNGAH 126
AL ++PTRELA Q+ RE+ G + A + ++ +
Sbjct: 204 EKHK-VGLRALILSPTRELAAQIYREMRKYSIDEGTSLRAAQFSKPAYPSQKPAFLSDEK 262
Query: 127 --IVVGTPGRLCDHIRGKGLNI--SHLKAVVLDEADEMLD-LGFRDDIEFILD--SSPKK 179
I++ TP R+ + LNI S ++ +V+DEAD + + F + + I SP
Sbjct: 263 YDILISTPMRIVGLLGLGKLNIDLSKVEWLVVDEADLLFEPEFFVEQLADIYSACQSPDI 322
Query: 180 RRMLMFSATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSD-RDNAIVNI 238
R +FSATIS + A+ + D RV + N + +D V + A+ +
Sbjct: 323 RVA-LFSATISVYVEEWAELIKSDLKRVIVGLRNSANETVDQELVFCGSEKGKLLALRQL 381
Query: 239 LRYHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALS---GELSQQERSNALQMMRDGRA 295
+ ++F ++ + + L ++ + + GE SQ++R ++ R G+
Sbjct: 382 VASGFKPPVLIFVQSKERAKQLFEELE--IYDNINVDVIHGERSQKQRDETMERFRIGKI 439
Query: 296 RVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSV 345
V I TD+ ARGID + LVI+ + + + +HR GRTGRAGR G ++
Sbjct: 440 WVLICTDLLARGIDFKGVNLVINYDFPQSDLSYIHRIGRTGRAGRSGKAI 489