RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0345

>gnl|CDD|35566 KOG0345, KOG0345, KOG0345, ATP-dependent RNA helicase [RNA processing and modification]. Length = 567
 Score =  221 bits (564), Expect = 5e-58
 Identities = 122/349 (34%), Positives = 197/349 (56%), Gaps = 10/349 (2%)

Query: 11  IGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFS 70
           + EAL E G+  +T VQ A +   L+ KDV+V A TGSGKT+AF L +   +     +  
Sbjct: 17  LLEALDESGFEKMTPVQAATIPLLLKNKDVVVEAVTGSGKTLAFLLPMLEIIYRREAKTP 76

Query: 71  PASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVC-IGGVSVHRE-RRDLQNGAHIV 128
           P     AL I+PTRELA Q+    +        +     +GG SV  + +   + G +I+
Sbjct: 77  PGQV-GALIISPTRELARQIREVAQPFLEHLPNLNCELLVGGRSVEEDIKTFKEEGPNIL 135

Query: 129 VGTPGRLCDHIR--GKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRMLMFS 186
           VGTPGRL D ++   + L+   L+ +VLDEAD +LD+GF   +  IL   PK+RR  +FS
Sbjct: 136 VGTPGRLLDILQREAEKLSFRSLEILVLDEADRLLDMGFEASVNTILSFLPKQRRTGLFS 195

Query: 187 ATISPAITTLAKNYQKDAVRVNIASENRQH--SDIDYRAVLVALSDRDNAIVNILRYHGA 244
           AT +  +  LA+   ++ VRV++  +++    S +    ++    ++ + +V++L  +  
Sbjct: 196 ATQTQEVEDLARAGLRNPVRVSVKEKSKSATPSSLALEYLVCEADEKLSQLVHLLNNNKD 255

Query: 245 KNAIVFCSTRASVSRFTKVLAEHL--FQVVALSGELSQQERSNALQMMRDGRARVCIATD 302
           K  IVF  T ASV  F K+ +  L   ++ ++ G++SQ+ R+  L+  R     V   TD
Sbjct: 256 KKCIVFFPTCASVEYFGKLFSRLLKKREIFSIHGKMSQKARAKVLEAFRKLSNGVLFCTD 315

Query: 303 VAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMS-VFVIPQ 350
           VAARG+D+P ++LV+  +   +P + +HR GRT RAGR+G + VF+ P+
Sbjct: 316 VAARGLDIPGIDLVVQFDPPKDPSSFVHRCGRTARAGREGNAIVFLNPR 364