RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0348

>gnl|CDD|35569 KOG0348, KOG0348, KOG0348, ATP-dependent RNA helicase [RNA processing and modification]. Length = 708
 Score =  190 bits (484), Expect = 9e-49
 Identities = 124/401 (30%), Positives = 190/401 (47%), Gaps = 73/401 (18%)

Query: 23  LTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAP 82
            TSVQ+  +   L  +D LV AQTGSGKT+A+ L +  +L A   +   +  P AL I P
Sbjct: 160 PTSVQKQAIPVLLEGRDALVRAQTGSGKTLAYLLPIVQSLQAMEPKIQRSDGPYALVIVP 219

Query: 83  TRELAVQVGRELEWLYAK-TGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRLCDHIRG 141
           TRELA+Q+   ++ L      +V  V +GG     E+  L+ G +I++GTPGRL DH++ 
Sbjct: 220 TRELALQIYETVQKLLKPFHWIVPGVLMGGEKKKSEKARLRKGINILIGTPGRLVDHLKN 279

Query: 142 -KGLNISHLKAVVLDEADEMLDLGFRDDIEFIL-------------DSSPKKRRMLMFSA 187
            K +  S L+ +VLDEAD +L+LGF  DI  IL                P + + ++ SA
Sbjct: 280 TKSIKFSRLRWLVLDEADRLLELGFEKDITQILKAVHSIQNAECKDPKLPHQLQNMLLSA 339

Query: 188 TISPAITTLAKNYQKDAVRVNI-ASENRQHSDIDY------------------------- 221
           T++  +  LA    KD V +++  S ++ +                              
Sbjct: 340 TLTDGVNRLADLSLKDPVYISLDKSHSQLNPKDKAVQEVDDGPAGDKLDSFAIPEQLLQR 399

Query: 222 ------RAVLVALSDRDNAIVNILRYHGAKNAIVFCSTRASV----SRFTKVLAEHLFQ- 270
                 +  LVAL+     ++N +++   +  IVF S   SV    S F++ L  HL   
Sbjct: 400 YTVVPPKLRLVALA---ALLLNKVKFEEKQKMIVFFSCSDSVEFHYSLFSEALLSHLEGS 456

Query: 271 -----------------VVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDL 313
                               L G + Q+ER++  Q     R  V + TDVAARG+DLP +
Sbjct: 457 SGAPDSEGLPPLFMDLKFYRLHGSMEQEERTSVFQEFSHSRRAVLLCTDVAARGLDLPHV 516

Query: 314 ELVIHAELSSNPENLLHRSGRTGRAGRKGMSV-FVIPQNMQ 353
            LV+  +   +  + LHR GRT RAG KG ++ F++P   +
Sbjct: 517 GLVVQYDPPFSTADYLHRVGRTARAGEKGEALLFLLPSEAE 557