RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0951
>gnl|CDD|36169 KOG0951, KOG0951, KOG0951, RNA helicase BRR2, DEAD-box superfamily [RNA processing and modification]. Length = 1674
Score = 42.3 bits (99), Expect = 4e-04
Identities = 80/411 (19%), Positives = 145/411 (35%), Gaps = 77/411 (18%)
Query: 18 RGYVNLTSVQEAILNPDLREKD-VLVSAQTGSGKT-VAFGLALASTLLAENDRFSPASAP 75
G +L +Q + + LR + +L+ A TG+GKT VA L + S AP
Sbjct: 305 FGKQSLNRIQSKVYDAALRGDENMLLCAPTGAGKTNVAVLTILQELGNHLREDGSVNLAP 364
Query: 76 LALA-IAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGR 134
+ IAP + L ++ A G+ V G + +E+ + ++V TP +
Sbjct: 365 FKIVYIAPMKALVQEMVGSFSKRLAPLGITVLELTGDSQLGKEQIE---ETQVIVTTPEK 421
Query: 135 LCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRMLMFSATISPAIT 194
D I K + ++ + V L DE+ L DD +L+S + S +
Sbjct: 422 W-DIITRKSGDRAYEQLVRLLIIDEIHLLH--DDRGPVLESIVARTFRRSESTEEGSRLV 478
Query: 195 TLAK---NYQKDAVRVNIASENRQHSDIDYR---------AVLVALSDRDNAIVN----- 237
L+ NY+ A + + E + D YR + + +N
Sbjct: 479 GLSATLPNYEDVASFLRVDPEGLFYFDSSYRPVPLKQQYIGITEKKPLKRFQAMNEACYE 538
Query: 238 -ILRYHGAKNAIVF-----------------CSTRASVSRFTK-------VLAEHLFQVV 272
+L + G +VF ++SRF + +L Q
Sbjct: 539 KVLEHAGKNQVLVFVHSRKETAKTARAIRDKALEEDTLSRFMREDSASREILRTEAGQAK 598
Query: 273 ALS-------------GELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIHA 319
L++++R + DG +V ++T A G++LP ++I
Sbjct: 599 NPDLKDLLPYGFAIHHAGLNRKDRELVEDLFADGHIQVLVSTATLAWGVNLPAHTVIIKG 658
Query: 320 ELSSNPE----------NLLHRSGRTGRAGRKGMSVFVIPQNMQRRAERLF 360
+PE +++ GR GR +I + +E +
Sbjct: 659 TQVYDPEKGRWTELSPLDVMQMLGRAGRPQYDTCGEGIIITD---HSELQY 706