RPSBLAST alignment for GI: 254780601 and conserved domain: KOG1000

>gnl|CDD|36218 KOG1000, KOG1000, KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily [Chromatin structure and dynamics]. Length = 689
 Score = 39.3 bits (91), Expect = 0.003
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 11/185 (5%)

Query: 172 ILDSSPKKRRMLMFSATISPAITTLAKNYQKDAVRVNIASENRQHSD---IDYR-AVLVA 227
           +L   P KRR +++ +     I     +  K A      +   +  +   + Y    +  
Sbjct: 416 VLKQLPPKRREVVYVSG--GRIDARMDDLVKAAADYTKVNSMERKHESLLLFYSLTGIAK 473

Query: 228 LSDRDNAIVNILRY--HGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSN 285
            +     I+          +  +VF   +  +      + +     + + G      R+ 
Sbjct: 474 AAAVCEYILENYFLPDAPPRKFLVFAHHQIVLDTIQVEVNKRKVGSIRIDGSTPSHRRTL 533

Query: 286 ALQMMR-DGRARVCIATDVAAR-GIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGM 343
             Q  +     RV + +  AA  G+ L    +V+ AEL  NP  LL    R  R G+K  
Sbjct: 534 LCQSFQTSEEVRVAVLSITAAGVGLTLTAASVVVFAELHWNPGVLLQAEDRAHRIGQKS- 592

Query: 344 SVFVI 348
           SVFV 
Sbjct: 593 SVFVQ 597