RPSBLAST alignment for GI: 254780601 and conserved domain: KOG1000
>gnl|CDD|36218 KOG1000, KOG1000, KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily [Chromatin structure and dynamics]. Length = 689
Score = 39.3 bits (91), Expect = 0.003
Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 11/185 (5%)
Query: 172 ILDSSPKKRRMLMFSATISPAITTLAKNYQKDAVRVNIASENRQHSD---IDYR-AVLVA 227
+L P KRR +++ + I + K A + + + + Y +
Sbjct: 416 VLKQLPPKRREVVYVSG--GRIDARMDDLVKAAADYTKVNSMERKHESLLLFYSLTGIAK 473
Query: 228 LSDRDNAIVNILRY--HGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSN 285
+ I+ + +VF + + + + + + G R+
Sbjct: 474 AAAVCEYILENYFLPDAPPRKFLVFAHHQIVLDTIQVEVNKRKVGSIRIDGSTPSHRRTL 533
Query: 286 ALQMMR-DGRARVCIATDVAAR-GIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGM 343
Q + RV + + AA G+ L +V+ AEL NP LL R R G+K
Sbjct: 534 LCQSFQTSEEVRVAVLSITAAGVGLTLTAASVVVFAELHWNPGVLLQAEDRAHRIGQKS- 592
Query: 344 SVFVI 348
SVFV
Sbjct: 593 SVFVQ 597