RPSBLAST alignment for GI: 254780601 and conserved domain: KOG4150
>gnl|CDD|39353 KOG4150, KOG4150, KOG4150, Predicted ATP-dependent RNA helicase [RNA processing and modification]. Length = 1034
Score = 39.7 bits (92), Expect = 0.002
Identities = 63/387 (16%), Positives = 130/387 (33%), Gaps = 63/387 (16%)
Query: 4 FENIPQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLL 63
+E+I ++ + E G ++ +L + + +GK
Sbjct: 272 WESIRSLLNKNTGESGI----AISLELLKFASEGRADGGNEARQAGKGTCPTSGSRKFQT 327
Query: 64 AENDRFSPASAPLALAIAPTRELAVQVGR----ELEWLYAKTGVVVAVCIGGVSVHRERR 119
A+ +L + E + +E + A+ V + +S +
Sbjct: 328 LC-----HATN--SLLPSEMVEHLRNGSKGQVVHVEVIKARKSAYVEMS-DKLSETTKSA 379
Query: 120 DLQNGAHIVVGTPGRLCDHIRGKGLN----ISHLKAVVLDE------------ADEM--- 160
+ G + + K L + + D++
Sbjct: 380 LKRIGLNTLYSHQAEAISAALAKSLCYNVPVFEELCKDTNSCALYLFPTKALAQDQLRAL 439
Query: 161 LDL--GFRDDI--EFILDSSPKKRRMLMFSATISPAITTLAKNYQKDAVRVNIASENRQH 216
DL GF I +P K R + S + + L V ++ + + +
Sbjct: 440 SDLIKGFEASINMGVYDGDTPYKDRTRLRSELANLSELEL--------VTIDGSPSSEKL 491
Query: 217 SDI-DYRAVLVALSDRDNAIVNI------LRYHGAKNAIVFCSTRASVSRFTK----VLA 265
+ + A + S++ + +V + + HG + I FC +R +LA
Sbjct: 492 FVLWNPSAPPTSKSEKSSKVVEVSHLFAEMVQHGLR-CIAFCPSRKLCELVLCLTREILA 550
Query: 266 E---HLFQ-VVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIHAEL 321
E HL + + + G ++R + G+ IAT+ GID+ L+ V+H
Sbjct: 551 ETAPHLVEAITSYRGGYIAEDRRKIESDLFGGKLCGIIATNALELGIDIGHLDAVLHLGF 610
Query: 322 SSNPENLLHRSGRTGRAGRKGMSVFVI 348
+ NL ++GR GR + ++V+V
Sbjct: 611 PGSIANLWQQAGRAGRRNKPSLAVYVA 637