HHsearch alignment for GI: 254780602 and conserved domain: COG0001

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism].
Probab=99.34  E-value=5.3e-12  Score=93.15  Aligned_cols=341  Identities=17%  Similarity=0.183  Sum_probs=184.9

Q ss_pred             CCCEEECCCCCCC--C-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9972665658974--9-889999999999983887569987789899999999864210133332233233454333322
Q gi|254780602|r   30 GIDVLCLTAGEPD--F-DMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFN  106 (400)
Q Consensus        30 g~~ii~l~~G~p~--~-~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~  106 (400)
T Consensus        52 Gn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~-~fg~Pt-e~E--i~~Aell~~~~p---~~e~vrfvnSGTEAtms  124 (432)
T COG0001          52 GNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGL-SFGAPT-ELE--VELAELLIERVP---SIEKVRFVNSGTEATMS  124 (432)
T ss_pred             CCEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCCC-HHH--HHHHHHHHHHCC---CCCEEEEECCHHHHHHH
T ss_conf             98754013057650008898799999999997267-778997-789--999999998658---65089986064089999


Q ss_pred             CC---CCCCCCCCCCCCCCCCCCCCCCCCCC-C--CCCCCC------CCCCCC-C----CCCCHHHHHHCCCCCC---CC
Q ss_conf             22---22233223222233332322222222-2--222222------222222-3----2221033310001221---22
Q gi|254780602|r  107 AL---MATVNMGDEVLIPRPYWVSYPDMVAL-C--GGIPVF------VDTQQD-D----NFQVSPEKLEQAITPK---TK  166 (400)
Q Consensus       107 ~~---~~~~~~Gd~Vlv~~P~y~~y~~~~~~-~--g~~~~~------v~~~~~-~----~~~~d~~~l~~~i~~~---~k  166 (400)
T Consensus       125 AiRlARa~TgR-~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-ND~~al~~~~~~~g~~IA  202 (432)
T COG0001         125 AIRLARAYTGR-DKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-NDLEALEEAFEEYGDDIA  202 (432)
T ss_pred             HHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEECC-CCHHHHHHHHHHCCCCEE
T ss_conf             99999876479-7599972888887118784267675557899999997345344788457-999999999987689679


Q ss_pred             CEEECCC--CCCCCCCCCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf             0121135--4210000123-333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r  167 WLFLNSP--SNPSGVVYSQ-NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM  243 (400)
Q Consensus       167 ~i~l~nP--~NPTG~v~s~-~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~  243 (400)
T Consensus       203 aVI-vEPv~gn-~g~i~p~~~Fl~~Lr~lt-~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-------lttlGKiIG-  271 (432)
T COG0001         203 AVI-VEPVAGN-MGVVPPEPGFLEGLRELT-EEHGALLIFDEVITGFRVALGGAQGYYGVEPD-------LTTLGKIIG-  271 (432)
T ss_pred             EEE-ECCCCCC-CCCCCCCHHHHHHHHHHH-HHCCCEEEEECCHHHCCCCCCCCCCCCCCCCC-------HHHHHHHHC-
T ss_conf             999-5424678-898989878999999999-97194899862212045477642010086963-------332224404-


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC---CCCEE
Q ss_conf             4454442211012268753100---12223322222222222234676432222221100000002455304---77603
Q gi|254780602|r  244 TGLRIGYAAGALSLIKSMIVLQ---GQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV---PGIRY  317 (400)
Q Consensus       244 ~G~RiG~~v~~~~li~~l~~~~---~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~---~g~~~  317 (400)
T Consensus       272 GGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~-~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~  350 (432)
T COG0001         272 GGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMT-EEGVYERLDALGERLAEGLRAAAERHGIPL  350 (432)
T ss_pred             CCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf             7752011256999996327788764567778868999999999999873-651899999999999999999999839985


Q ss_pred             EE-CCCCEEE-EEECCCCCCCCCCCCCCCCCH----HHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHH
Q ss_conf             30-2740899-862641023321133224898----99999999873979983502289972899962999999999999
Q gi|254780602|r  318 MI-PDGAFYL-YPSCQDLIGKKSPSGDVIRTD----LDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVR  391 (400)
Q Consensus       318 ~~-p~g~~y~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~r  391 (400)
T Consensus       351 ~v~~~gsm~~i~F~~~~~~n~~----da~~sd~~~~~~~~~~~l-~~GV~l~ps~-~--ea-~flS~ahte~di~~~~~a  421 (432)
T COG0001         351 TVNRVGSMFGIFFTEEGVRNYA----DAKRSDVERFAKFFHHLL-NRGVYLAPSQ-F--EA-GFLSTAHTEEDIDRTLEA  421 (432)
T ss_pred             EEEEECCEEEEEECCCCCCCHH----HHHHHCHHHHHHHHHHHH-HCCCCCCCCC-C--CC-EEEECCCCHHHHHHHHHH
T ss_conf             8862042589995589988899----998635699999999999-6882347755-5--54-552004689999999999


Q ss_pred             HHHHHHHCC
Q ss_conf             999998609
Q gi|254780602|r  392 IKRFCHSLQ  400 (400)
Q Consensus       392 l~~~l~~l~  400 (400)
T Consensus       422 ~~~~~~~~~  430 (432)
T COG0001         422 ADEAFKELA  430 (432)
T ss_pred             HHHHHHHHH
T ss_conf             999999863