HHsearch alignment for GI: 254780602 and conserved domain: COG0001
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism].
Probab=99.34 E-value=5.3e-12 Score=93.15 Aligned_cols=341 Identities=17% Similarity=0.183 Sum_probs=184.9
Q ss_pred CCCEEECCCCCCC--C-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9972665658974--9-889999999999983887569987789899999999864210133332233233454333322
Q gi|254780602|r 30 GIDVLCLTAGEPD--F-DMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFN 106 (400)
Q Consensus 30 g~~ii~l~~G~p~--~-~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~ 106 (400)
T Consensus 52 Gn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~-~fg~Pt-e~E--i~~Aell~~~~p---~~e~vrfvnSGTEAtms 124 (432)
T COG0001 52 GNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGL-SFGAPT-ELE--VELAELLIERVP---SIEKVRFVNSGTEATMS 124 (432)
T ss_pred CCEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCCC-HHH--HHHHHHHHHHCC---CCCEEEEECCHHHHHHH
T ss_conf 98754013057650008898799999999997267-778997-789--999999998658---65089986064089999
Q ss_pred CC---CCCCCCCCCCCCCCCCCCCCCCCCCC-C--CCCCCC------CCCCCC-C----CCCCHHHHHHCCCCCC---CC
Q ss_conf 22---22233223222233332322222222-2--222222------222222-3----2221033310001221---22
Q gi|254780602|r 107 AL---MATVNMGDEVLIPRPYWVSYPDMVAL-C--GGIPVF------VDTQQD-D----NFQVSPEKLEQAITPK---TK 166 (400)
Q Consensus 107 ~~---~~~~~~Gd~Vlv~~P~y~~y~~~~~~-~--g~~~~~------v~~~~~-~----~~~~d~~~l~~~i~~~---~k 166 (400)
T Consensus 125 AiRlARa~TgR-~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-ND~~al~~~~~~~g~~IA 202 (432)
T COG0001 125 AIRLARAYTGR-DKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-NDLEALEEAFEEYGDDIA 202 (432)
T ss_pred HHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEECC-CCHHHHHHHHHHCCCCEE
T ss_conf 99999876479-7599972888887118784267675557899999997345344788457-999999999987689679
Q ss_pred CEEECCC--CCCCCCCCCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 0121135--4210000123-333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 167 WLFLNSP--SNPSGVVYSQ-NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 167 ~i~l~nP--~NPTG~v~s~-~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
T Consensus 203 aVI-vEPv~gn-~g~i~p~~~Fl~~Lr~lt-~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-------lttlGKiIG- 271 (432)
T COG0001 203 AVI-VEPVAGN-MGVVPPEPGFLEGLRELT-EEHGALLIFDEVITGFRVALGGAQGYYGVEPD-------LTTLGKIIG- 271 (432)
T ss_pred EEE-ECCCCCC-CCCCCCCHHHHHHHHHHH-HHCCCEEEEECCHHHCCCCCCCCCCCCCCCCC-------HHHHHHHHC-
T ss_conf 999-5424678-898989878999999999-97194899862212045477642010086963-------332224404-
Q ss_pred CCCCCCCCCCHHHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC---CCCEE
Q ss_conf 4454442211012268753100---12223322222222222234676432222221100000002455304---77603
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQ---GQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV---PGIRY 317 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~---~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~---~g~~~ 317 (400)
T Consensus 272 GGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~-~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~ 350 (432)
T COG0001 272 GGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMT-EEGVYERLDALGERLAEGLRAAAERHGIPL 350 (432)
T ss_pred CCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf 7752011256999996327788764567778868999999999999873-651899999999999999999999839985
Q ss_pred EE-CCCCEEE-EEECCCCCCCCCCCCCCCCCH----HHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHH
Q ss_conf 30-2740899-862641023321133224898----99999999873979983502289972899962999999999999
Q gi|254780602|r 318 MI-PDGAFYL-YPSCQDLIGKKSPSGDVIRTD----LDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVR 391 (400)
Q Consensus 318 ~~-p~g~~y~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~r 391 (400)
T Consensus 351 ~v~~~gsm~~i~F~~~~~~n~~----da~~sd~~~~~~~~~~~l-~~GV~l~ps~-~--ea-~flS~ahte~di~~~~~a 421 (432)
T COG0001 351 TVNRVGSMFGIFFTEEGVRNYA----DAKRSDVERFAKFFHHLL-NRGVYLAPSQ-F--EA-GFLSTAHTEEDIDRTLEA 421 (432)
T ss_pred EEEEECCEEEEEECCCCCCCHH----HHHHHCHHHHHHHHHHHH-HCCCCCCCCC-C--CC-EEEECCCCHHHHHHHHHH
T ss_conf 8862042589995589988899----998635699999999999-6882347755-5--54-552004689999999999
Q ss_pred HHHHHHHCC
Q ss_conf 999998609
Q gi|254780602|r 392 IKRFCHSLQ 400 (400)
Q Consensus 392 l~~~l~~l~ 400 (400)
T Consensus 422 ~~~~~~~~~ 430 (432)
T COG0001 422 ADEAFKELA 430 (432)
T ss_pred HHHHHHHHH
T ss_conf 999999863