HHsearch alignment for GI: 254780602 and conserved domain: COG0076
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism].
Probab=99.28 E-value=8.7e-12 Score=91.86 Aligned_cols=271 Identities=12% Similarity=0.081 Sum_probs=164.5
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------
Q ss_conf 889999999999983887569987789899999999864210133332233233454333322222223322--------
Q gi|254780602|r 44 DMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMG-------- 115 (400)
Q Consensus 44 ~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~G-------- 115 (400)
T Consensus 73 ~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~ 151 (460)
T COG0076 73 RVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAES 151 (460)
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 867999999999873479981238315888999999999995799-7660679617079999999999999876644202
Q ss_pred C------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC--EEECCCCCCCCCCCCCCCCC
Q ss_conf 3------222233332322222222222222222222232221033310001221220--12113542100001233332
Q gi|254780602|r 116 D------EVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKW--LFLNSPSNPSGVVYSQNRLR 187 (400)
Q Consensus 116 d------~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~--i~l~nP~NPTG~v~s~~~l~ 187 (400)
T Consensus 152 ~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---Ddi~ 227 (460)
T COG0076 152 GKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---DDIE 227 (460)
T ss_pred CCCCCCCEEEECCCCCEEHHHHHHHHCCCCEEEEEECC-CEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCC---CCHH
T ss_conf 34468874994574312099999981885237875247-5056899999999874647649997268888777---8899
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCC--CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH--HHHHHHH
Q ss_conf 111223333320111012211000--001223322211123332257414654432234454442211012--2687531
Q gi|254780602|r 188 ALADVLVRNPHVHIISDDIYEHIV--YRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALS--LIKSMIV 263 (400)
Q Consensus 188 ~i~~~~a~~~~i~ii~De~Y~~l~--~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~--li~~l~~ 263 (400)
T Consensus 228 ~ia~ia-~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l-~~--vdSIt~-d~HK~g~aP-~~~G~il~rd~e~l~~~~~~ 301 (460)
T COG0076 228 ELADIA-EEYGIWLHVDAAFGGFLLPFLEPDGRWDFGL-EG--VDSITV-DGHKYGLAP-IGCGVVLFRDEEALRRILIF 301 (460)
T ss_pred HHHHHH-HHCCCCEEEECCCCCHHHHCCCCCCHHHCCC-CC--CEEEEE-CCCCCCCCC-CCCEEEEEECHHHHHHHHHC
T ss_conf 999999-9769978987344002110247422535178-88--208998-864277888-87069999688984677612
Q ss_pred HCCCCCC--------CCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE-CCCCEEEE
Q ss_conf 0012223--------322222-----2222222346764322222211000000024553047760330-27408998
Q gi|254780602|r 264 LQGQQTS--------GACSIA-----QWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI-PDGAFYLY 327 (400)
Q Consensus 264 ~~~~~~~--------~~~~~~-----q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~-p~g~~y~~ 327 (400)
T Consensus 302 ~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~l--G~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~f 377 (460)
T COG0076 302 ADYYLPGGGIPNFTILGSRPGRQALALYANLRRL--GREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAF 377 (460)
T ss_pred CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEE
T ss_conf 3667787786663688505418999999999996--788899999999999999999986478827633886507999