HHsearch alignment for GI: 254780602 and conserved domain: COG0520
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].
Probab=99.88 E-value=3e-22 Score=155.62 Aligned_cols=329 Identities=19% Similarity=0.203 Sum_probs=215.4
Q ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHHC---CCC--CCCCCC----CCHHHHHHHHHHHHHHCCCCCC-CCCCCCCCC
Q ss_conf 997266565897498899999999999838---875--699877----8989999999986421013333-223323345
Q gi|254780602|r 30 GIDVLCLTAGEPDFDMPENVKYAVVRAMER---GET--KYTAVA----GISPLREAIVEKFRRDNDLHYT-SDQIIVGTG 99 (400)
Q Consensus 30 g~~ii~l~~G~p~~~~p~~i~~a~~~al~~---~~~--~Y~~~~----G~~~lR~aia~~~~~~~g~~~~-~e~I~it~G 99 (400)
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~------a~~~~eIvft~~ 92 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLN------ADSSDEIVFTRG 92 (405)
T ss_pred CCCCEECCCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC------CCCCCEEEEECC
T ss_conf 67847636765666-78899999999999740245755441279999999999999999819------998772999598
Q ss_pred CCCCCCCCCCCC---CCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECC
Q ss_conf 433332222222---332232222333323----2222222222222222222223222103331000122122012113
Q gi|254780602|r 100 AKHVIFNALMAT---VNMGDEVLIPRPYWV----SYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNS 172 (400)
Q Consensus 100 ~~~~l~~~~~~~---~~~Gd~Vlv~~P~y~----~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~n 172 (400)
T Consensus 93 tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g--~~~~d~~~~~i~~~Tklvais~ 170 (405)
T COG0520 93 TTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDG--LLDLDALEKLITPKTKLVALSH 170 (405)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCC--CCCHHHHHHHCCCCCEEEEEEC
T ss_conf 37999999997024106899899804655200899999998759689998418999--7288999864699944999966
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC-CCCCCCCCCCCC
Q ss_conf 5421000012333321112233333201110122110000012233222111233322574146544-322344544422
Q gi|254780602|r 173 PSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSK-AYAMTGLRIGYA 251 (400)
Q Consensus 173 P~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK-~~~~~G~RiG~~ 251 (400)
T Consensus 171 vSn~tG~~~p---v~~I~~la-~~~ga~v~VDaaq~~----~h~~idv~~-----l~~Df~afsgHKwl~gP~G--iGvL 235 (405)
T COG0520 171 VSNVTGTVNP---VKEIAELA-HEHGALVLVDAAQAA----GHLPIDVQE-----LGCDFLAFSGHKWLLGPTG--IGVL 235 (405)
T ss_pred CCCCCCCCCC---HHHHHHHH-HHCCCEEEEECCCCC----CCCCCCHHH-----CCCCEEEECCCCCCCCCCC--EEEE
T ss_conf 4167554040---99999999-984998999771334----756688556-----1898999767432579985--2999
Q ss_pred CCHHHHHHHHHHHCCC---------------------CCCCCCCCCCCCC-CCCCCCCCC-CCCCCCCCCCCCCCCHHHH
Q ss_conf 1101226875310012---------------------2233222222222-222346764-3222222110000000245
Q gi|254780602|r 252 AGALSLIKSMIVLQGQ---------------------QTSGACSIAQWAA-VEALNGPQD-FVVNNRKIFEYRRDLCVAQ 308 (400)
Q Consensus 252 v~~~~li~~l~~~~~~---------------------~~~~~~~~~q~a~-~~~l~~~~~-~~~~~~~~~~~~r~~~~~~ 308 (400)
T Consensus 236 y~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~ 315 (405)
T COG0520 236 YVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEG 315 (405)
T ss_pred EECHHHHHHCCCCCCCCCCEEECCCCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98665584378977788724401445553015641531557843788986999999999857999999999999999999
Q ss_pred HHCCCCCEEEECC----CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC--------CCCEEEE
Q ss_conf 5304776033027----408998626410233211332248989999999987397998350228--------9972899
Q gi|254780602|r 309 LQGVPGIRYMIPD----GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG--------HGPSIRI 376 (400)
Q Consensus 309 L~~~~g~~~~~p~----g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg--------~~~~iRi 376 (400)
T Consensus 316 L~~~~~v~i~g~~~~~r~~~vsF-~v~------------~~~~~dv~~~L-~~~gI~vr~g~~ca~p~~~~~~~~~~iR~ 381 (405)
T COG0520 316 LSELPGVEIYGPPDADRGGIVSF-NVK------------GIHPHDVATLL-DEKGIAVRAGHHCAQPLHRLLGVDATIRA 381 (405)
T ss_pred HHCCCCEEEECCCCCCCCCEEEE-EEC------------CCCHHHHHHHH-HHCCEEEEECCCCCHHHHHHCCCCCCEEE
T ss_conf 85489849964663467746999-978------------95989999999-86786998256443267875377775799
Q ss_pred EEE--CCHHHHHHHHHHHHHHH
Q ss_conf 962--99999999999999999
Q gi|254780602|r 377 SYA--VSDAILEEACVRIKRFC 396 (400)
Q Consensus 377 s~~--~~~e~l~~al~rl~~~l 396 (400)
T Consensus 382 S~~~YNt~edid~l~~aL~~~~ 403 (405)
T COG0520 382 SLHLYNTEEDVDRLLEALKKAL 403 (405)
T ss_pred EEECCCCHHHHHHHHHHHHHHH
T ss_conf 9742599999999999999874