HHsearch alignment for GI: 254780602 and conserved domain: COG1168
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=489.52 Aligned_cols=381 Identities=24% Similarity=0.380 Sum_probs=335.8
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 93678898738975899999999999986997266565897498899999999999838875699877898999999998
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~ 80 (400)
T Consensus 1 ~~~F~~~~~r~~t~---s~KWd~~~---g~~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w 72 (388)
T COG1168 1 MYDFDTVIERLGTN---SLKWDAHP---GNEDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHW 72 (388)
T ss_pred CCCHHHHHHHCCCC---CEECCCCC---CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC--CCCHHHHHHHHHH
T ss_conf 97534556642887---50025568---9888413432004678887999999999865877887--8877899999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHHHC
Q ss_conf 64210133332233233454333322222223322322223333232222222222222222222-22322210333100
Q gi|254780602|r 81 FRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQ-QDDNFQVSPEKLEQ 159 (400)
Q Consensus 81 ~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~ 159 (400)
T Consensus 73 ~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~ 152 (388)
T COG1168 73 FKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEK 152 (388)
T ss_pred HHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHH
T ss_conf 99713777885528983751276999999837699826964888618999875169679746643469847752999999
Q ss_pred CCC-CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 012-2122012113542100001233332111223333320111012211000001223322211123332257414654
Q gi|254780602|r 160 AIT-PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVS 238 (400)
Q Consensus 160 ~i~-~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~S 238 (400)
T Consensus 153 ~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~k-h~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saS 231 (388)
T COG1168 153 AFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLR-HGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSAS 231 (388)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHCCEEEEEECC
T ss_conf 9843776089993799999864369999999999998-399898303356612169876654326955432359984052
Q ss_pred CCCCCCCCCCCCCCCH-HHHHHH-HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC-CCCC
Q ss_conf 4322344544422110-122687-531001222332222222222223467643222222110000000245530-4776
Q gi|254780602|r 239 KAYAMTGLRIGYAAGA-LSLIKS-MIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQG-VPGI 315 (400)
Q Consensus 239 K~~~~~G~RiG~~v~~-~~li~~-l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~-~~g~ 315 (400)
T Consensus 232 KtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v 311 (388)
T COG1168 232 KTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGV 311 (388)
T ss_pred CCCCCHHHHHEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 21560444421478348899999999998733799846889999999972649999999999998999999998659874
Q ss_pred EEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC--CEEEEEEECCHHHHHHHHHHHH
Q ss_conf 03302740899862641023321133224898999999998739799835022899--7289996299999999999999
Q gi|254780602|r 316 RYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG--PSIRISYAVSDAILEEACVRIK 393 (400)
Q Consensus 316 ~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~--~~iRis~~~~~e~l~~al~rl~ 393 (400)
T Consensus 312 ~v~~p~gTYL~WLD~r~l~----------l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~ 381 (388)
T COG1168 312 KVTEPQGTYLAWLDCRELG----------LDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLK 381 (388)
T ss_pred EEECCCCCEEEEEECCCCC----------CCHHHHHHHHHHHHCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH
T ss_conf 7866887566653200238----------985789999997515713578756767874588863798899999999999
Q ss_pred HHHHHCC
Q ss_conf 9998609
Q gi|254780602|r 394 RFCHSLQ 400 (400)
Q Consensus 394 ~~l~~l~ 400 (400)
T Consensus 382 ~al~~~~ 388 (388)
T COG1168 382 RALKKRR 388 (388)
T ss_pred HHHHCCC
T ss_conf 9985259